F3H, FJ919633.1-F3H.m1 (mRNA) Malus x domestica

Transcript Overview


Name	F3H
Unique Name	FJ919633.1-F3H.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	flavonoid 3' hydroxylase IIb

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
FJ919633.1-F3H.m1-cds1	FJ919633.1-F3H.m1-cds1	Malus x domestica	CDS
FJ919633.1-F3H.m1-cds2	FJ919633.1-F3H.m1-cds2	Malus x domestica	CDS
FJ919633.1-F3H.m1-cds3	FJ919633.1-F3H.m1-cds3	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
F3H	FJ919633.1-F3H.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	237687732
nuccore	FJ919633.1

Alignments

Feature Name	Type	Location	Analysis
FJ919633	region	FJ919633:1069..4745+	NCBI Rosaceae gene and mRNA sequences
Chr06	chromosome	Chr06:33501285..33504351+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr6	chromosome	chr6:21701903..21704969+	Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr6	chromosome	chr6:26649387..26652453+	Malus x domestica Whole Genome v1.0p Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at FJ919633:1069..4745+
coding sequence from alignment at FJ919633:1069..4745+

mRNA sequence

>FJ919633.1-F3H.m1 ID=FJ919633.1-F3H.m1; Name=F3H; organism=Malus x domestica; type=mRNA; length=1536bp
atgtttgttctcatattcttcaccgttgtcttggccttcttcttataccg
gctcttcgcccccggcgggagccgccacgctctgcctcttccgccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcattctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctccagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggaggaagta
ggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgagctt
agggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatgg
tagggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggcc
gacgagttcaaatccatggtggtggagatgatggtgttggctggcgtttt
caacatcggcgacttcatcccggccctcgagtggctggacttgcaggggg
tggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttgacc
gccattgttgaagaccacaagaggagcggcgaagggaagcacgtggacat
gctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgcca
agctcacggacactgagattaaagctttgcttttgaacatgttcacagct
ggcactgacacgtcatcaagcacggtggaatgggccatagcagaactcct
tcgccaccccaagattctagcccaactccaacaagagctggaccaagtag
tgggccgggaccggctcgtaaccgagtcggacctgcccaacttgacctac
ctccaagcagtaatcaaggaaacctttcggctacacccgtcaaccccgct
ctccctgcctcgaatggcgtccgagagttgcgaaatcaacgggttccaca
tccccaagggtgccactcttctggtcaacgtatgggccatatctcgcgac
ccggcccaatggtccgaaccgcttgagtttagacccgagcggttcttgcc
gggtggagagaagcccaatgtggacgtcaagggtaatgatttcgaggtta
taccgtttggggccgggcggagaatatgcgccgggatgacccttgggctg
cgtatggtgtctctaatgatcgcgaccctggtccatggttttgattggac
cttggctgatgggctcacacctgagaaattgaacatggacgaggcttatg
ggctcacactacaaagagccgcaccattaatggtgcacccacgtaacagg
ctagcccctcatgcatataatgcgtcatcaccttga

protein sequence of F3H

>FJ919633.1-F3H.p1 ID=FJ919633.1-F3H.p1; Name=F3H; organism=Malus x domestica; type=polypeptide; length=511bp
MFVLIFFTVVLAFFLYRLFAPGGSRHALPLPPGPKPWPVVGNLPHLGPVP
HHSLAALARQYGPLMHLRLGFVDVVVAASASVASQFLKTHDANFSSRPPN
SGAKHLAYNYQDLVFAPYGPRWRMLRKISSVHLFSGKALDDLKHVRQEEV
GVLAHGLASAGSKPVSLGQLLNVCTVNALGRVMVGRRLFGDGGGREDQKA
DEFKSMVVEMMVLAGVFNIGDFIPALEWLDLQGVAGKMKKLHKRFDAFLT
AIVEDHKRSGEGKHVDMLTTLLSLTDDADGEGAKLTDTEIKALLLNMFTA
GTDTSSSTVEWAIAELLRHPKILAQLQQELDQVVGRDRLVTESDLPNLTY
LQAVIKETFRLHPSTPLSLPRMASESCEINGFHIPKGATLLVNVWAISRD
PAQWSEPLEFRPERFLPGGEKPNVDVKGNDFEVIPFGAGRRICAGMTLGL
RMVSLMIATLVHGFDWTLADGLTPEKLNMDEAYGLTLQRAAPLMVHPRNR
LAPHAYNASSP

mRNA from alignment at FJ919633:1069..4745+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>FJ919633.1-F3H.m1 ID=FJ919633.1-F3H.m1; Name=F3H; organism=Malus x domestica; type=mRNA; length=3677bp; location=Sequence derived from: FJ919633:1069..4745+ (Malus x domestica
atgtttgttctcatattcttcaccgttgtcttggccttcttcttataccg
gctcttcgcccccggcgggagccgccacgctctgcctcttccgccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcattctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctccagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggtaagcaat
tcggccgtcgtctttttacgttgattttctctacacttcattaatgcatg
ttttattaattatctagcaatcgaaaactgatttattcttaaattgaatc
actaggttgactacacgtttcttaaagcttttattaaaaaatttaatcca
tcatcataatcgttaatcaacaattaattgtggtcataattatgaagttg
ttactccatgtaagaaaattggtgcattttatgctcactactatatttat
catcgtttgatgagtttaaattttaatattggtattgatccactgtacag
atctcaaatgacgacgataaataaggtggtgaaacatcatcatcgcttga
ggatgatgcacaaaaatattgccataagaaaatagtgtatgaaagtgtga
ttaatggtagactactacaggtgatgaattatcgagatataatttttctt
ttcaaatcactgagttttgaaatcaaagccctagtaatattgtctctaga
ccctgcttactaatttagtttggagtagtgatatatataatctctaaacc
ctagtaatattgtctgcaataagataaaatagactcgtaaatcttaggat
taactatattttacatcacaaggtttggagatcgtttgcacaatacaaca
acaacaacaacaaagcattttcccactaagtggggtcggctatatgaatc
ttagaacgccattgcgctcggttttgtgtcatgtcctccgttagatccaa
gtactctaagtcttttcttagggtctcttccaaagttttcctaggtcttc
ctctaccccttcggccccgaacctctgtcccgtagtcacatcttcgaacc
ggagcgttagtaggccttctttgctcatgtccaaaccaccgtaaccgatt
ttctctcatctttccttcaacttcggctactcctactttacctcggatat
cctcattcccaatcttatcatttcttatgtgcccacacatcccacgaagc
atccttatctccgctacacccattttgtgtacgtgttgatgcttcaccgc
ccaacattctatgccatacaacatcgctggccttattgccgtcctataaa
attttcccttgagcttcagtgacctatgacggtcacacaacacgccggat
gcactcttacacttcatccatccatcttgtattctatggttgagatctcc
atctaattctccgttctcgtgcaagatagatcctaggtagcgaaaacggt
cgctttttgtgatatttacatattacaccacgtcatttcttaattacact
aatttaaattttccttcaatttgatgtttgagatactataattgcataag
tcttaatgaaacatttttgatactgtttacttttaatgttaaagatattt
ttactctaaaaagttattcctagtactattcacttacaatatttttttgt
tttcaaagtttttaagttttttttttttttaataatattataggaggaag
taggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgagc
ttagggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgat
ggtagggcggaggctcttcggagacggcggcgggcgcgaagaccagaagg
ccgacgagttcaaatccatggtggtggagatgatggtgttggctggcgtt
ttcaacatcggcgacttcatcccggccctcgagtggctggacttgcaggg
ggtggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttga
ccgccattgttgaagaccacaagaggagcggcgaagggaagcacgtggac
atgctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgc
caagctcacggacactgagattaaagctttgcttttggtacgtaggccct
ctctctctctctctctctctctctctctctctcccttcattttgtttgaa
ccgttgcatatgataacaaaaggatttatagtatagtttgactttgagga
ttttagaaaaataagtattgtttgttttaataagtgaagtattttttttt
ttcaaattattttcacttttcgtacactttttttattatctttgtgctta
acatttctttatcaacttgttcggtttagttattaaaagaaaagatgaac
gctcaagaagtgaaaatttgtcgttcttaattattattttgaatttttat
ctctcttttagacacttttttttcatttaatgttgttcatatgaagtgta
aaactattttatagtgtgtcaaaaatacttctgttaataaaaataaatca
gaaatattattaggacataaatacaactttccacaatttccccaaaatat
aaatttatttatactaatttccccaatgttataagtttttactaattccc
tctgtagatatgttttggtttttcagctacctttcttgttggccagtggt
gtccacgtcatctttagtcacattactacaaaaagctattagactgaccc
acccataataattttgatgcacacagaacatgttcacagctggcactgac
acgtcatcaagcacggtggaatgggccatagcagaactccttcgccaccc
caagattctagcccaactccaacaagagctggaccaagtagtgggccggg
accggctcgtaaccgagtcggacctgcccaacttgacctacctccaagca
gtaatcaaggaaacctttcggctacacccgtcaaccccgctctccctgcc
tcgaatggcgtccgagagttgcgaaatcaacgggttccacatccccaagg
gtgccactcttctggtcaacgtatgggccatatctcgcgacccggcccaa
tggtccgaaccgcttgagtttagacccgagcggttcttgccgggtggaga
gaagcccaatgtggacgtcaagggtaatgatttcgaggttataccgtttg
gggccgggcggagaatatgcgccgggatgacccttgggctgcgtatggtg
tctctaatgatcgcgaccctggtccatggttttgattggaccttggctga
tgggctcacacctgagaaattgaacatggacgaggcttatgggctcacac
tacaaagagccgcaccattaatggtgcacccacgtaacaggctagcccct
catgcatataatgcgtcatcaccttga

Coding sequence (CDS) from alignment at FJ919633:1069..4745+

>FJ919633.1-F3H.m1 ID=FJ919633.1-F3H.m1; Name=F3H; organism=Malus x domestica; type=CDS; length=1536bp; location=Sequence derived from: FJ919633:1069..4745+ (Malus x domestica
atgtttgttctcatattcttcaccgttgtcttggccttcttcttataccg
gctcttcgcccccggcgggagccgccacgctctgcctcttccgccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcattctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctccagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggaggaagta
ggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgagctt
agggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatgg
tagggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggcc
gacgagttcaaatccatggtggtggagatgatggtgttggctggcgtttt
caacatcggcgacttcatcccggccctcgagtggctggacttgcaggggg
tggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttgacc
gccattgttgaagaccacaagaggagcggcgaagggaagcacgtggacat
gctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgcca
agctcacggacactgagattaaagctttgcttttgaacatgttcacagct
ggcactgacacgtcatcaagcacggtggaatgggccatagcagaactcct
tcgccaccccaagattctagcccaactccaacaagagctggaccaagtag
tgggccgggaccggctcgtaaccgagtcggacctgcccaacttgacctac
ctccaagcagtaatcaaggaaacctttcggctacacccgtcaaccccgct
ctccctgcctcgaatggcgtccgagagttgcgaaatcaacgggttccaca
tccccaagggtgccactcttctggtcaacgtatgggccatatctcgcgac
ccggcccaatggtccgaaccgcttgagtttagacccgagcggttcttgcc
gggtggagagaagcccaatgtggacgtcaagggtaatgatttcgaggtta
taccgtttggggccgggcggagaatatgcgccgggatgacccttgggctg
cgtatggtgtctctaatgatcgcgaccctggtccatggttttgattggac
cttggctgatgggctcacacctgagaaattgaacatggacgaggcttatg
ggctcacactacaaagagccgcaccattaatggtgcacccacgtaacagg
ctagcccctcatgcatataatgcgtcatcaccttga