F3H, FJ919632.1-F3H.m1 (mRNA) Malus x domestica

Transcript Overview


Name	F3H
Unique Name	FJ919632.1-F3H.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	flavonoid 3' hydroxylase IIa

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
FJ919632.1-F3H.m1-cds1	FJ919632.1-F3H.m1-cds1	Malus x domestica	CDS
FJ919632.1-F3H.m1-cds2	FJ919632.1-F3H.m1-cds2	Malus x domestica	CDS
FJ919632.1-F3H.m1-cds3	FJ919632.1-F3H.m1-cds3	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
F3H	FJ919632.1-F3H.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	237687730
nuccore	FJ919632.1

Alignments

Feature Name	Type	Location	Analysis
FJ919632	region	FJ919632:1069..4135+	NCBI Rosaceae gene and mRNA sequences
Chr06	chromosome	Chr06:33501285..33504351+	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr6	chromosome	chr6:21701903..21704969+	Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr6	chromosome	chr6:26649387..26652453+	Malus x domestica Whole Genome v1.0p Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at FJ919632:1069..4135+
coding sequence from alignment at FJ919632:1069..4135+

mRNA sequence

>FJ919632.1-F3H.m1 ID=FJ919632.1-F3H.m1; Name=F3H; organism=Malus x domestica; type=mRNA; length=1536bp
atgtttgttctcatattcttcaccgttgtcttggccttcttcttatacag
gctcttcgcccccggcgggagccgccacgctcagccccttccaccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcactctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctctagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggaggaagta
ggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgaactt
agggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatgg
tagggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggcc
gacgagttcaaatccatggtggtggagatgatggtgttggctggcgtttt
caacatcggcgacttcatcccggccctcgagtggctggacttgcaggggg
tggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttgacc
gccattgttgaagaccacaagaggagcggcgaagggaagcacgtggacat
gctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgcca
agctcacggacactgagattaaagctttgcttttgaacatgttcacagct
ggcactgacacgtcatcaagcacggtggaatgggccatagcagaactcct
tcgccaccccaagattctagcccaactccaacaagagctggaccaagtag
cggggcgggatcggctcataaccgagtcggacctgcctaacttgacctac
ctccaagcagtaatcaaggaaacctttcggctacacccgtcaaccccgct
ctccctgcctcgaatggcgtccgagagttgcgaaatcaacgggttccaca
tccccaagggtgccactcttctggtcaacgtatgggccatatctcgcgac
ccggcccaatggtccgaaccgcttgagtttagacccgagcggttcttgcc
gggtggagagaagcccaatgtggacgtcaagggtaatgatttcgaggtta
taccgtttggggccgggcggagaatatgcgccgggatgacccttgggctg
cgtatggtgtctctaatgaccgcgaccctggtccatggttttgattggac
cttggctgatgggctcacacctgagaaattgaacatggacgaggcttatg
ggctcacactacaaagagccgcaccattaatggtgcacccacgtaacagg
ctagcccctcatgcatataatgcgtcatcaccttga

protein sequence of F3H

>FJ919632.1-F3H.p1 ID=FJ919632.1-F3H.p1; Name=F3H; organism=Malus x domestica; type=polypeptide; length=511bp
MFVLIFFTVVLAFFLYRLFAPGGSRHAQPLPPGPKPWPVVGNLPHLGPVP
HHSLAALARQYGPLMHLRLGFVDVVVAASASVASQFLKTHDANFSSRPPN
SGAKHLAYNYQDLVFAPYGPRWRMLRKISSVHLFSGKALDDLKHVRQEEV
GVLAHGLASAGSKPVNLGQLLNVCTVNALGRVMVGRRLFGDGGGREDQKA
DEFKSMVVEMMVLAGVFNIGDFIPALEWLDLQGVAGKMKKLHKRFDAFLT
AIVEDHKRSGEGKHVDMLTTLLSLTDDADGEGAKLTDTEIKALLLNMFTA
GTDTSSSTVEWAIAELLRHPKILAQLQQELDQVAGRDRLITESDLPNLTY
LQAVIKETFRLHPSTPLSLPRMASESCEINGFHIPKGATLLVNVWAISRD
PAQWSEPLEFRPERFLPGGEKPNVDVKGNDFEVIPFGAGRRICAGMTLGL
RMVSLMTATLVHGFDWTLADGLTPEKLNMDEAYGLTLQRAAPLMVHPRNR
LAPHAYNASSP

mRNA from alignment at FJ919632:1069..4135+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>FJ919632.1-F3H.m1 ID=FJ919632.1-F3H.m1; Name=F3H; organism=Malus x domestica; type=mRNA; length=3067bp; location=Sequence derived from: FJ919632:1069..4135+ (Malus x domestica
atgtttgttctcatattcttcaccgttgtcttggccttcttcttatacag
gctcttcgcccccggcgggagccgccacgctcagccccttccaccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcactctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctctagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggtaagcaat
tcggccgtcgtctttttacgatgattttctctacacttcattaatgcatg
ttttattaattatctagcaatcgaaaactgatttattcttaaattaaatc
actaggttgactacacgtttcttaaagcttttattaaaaaaaataatcca
tcatcataattgttaattaacaattaattgtggtcttaattatgtagttg
ttactccatgtaagaaaattagtgcattttatgctcactactatatttat
catcatttgatgagtttaaattttaagatttgtatcgatccacataacaa
atgacggcgataaataaggtggtgaagcatcatcatcgcttgagtacaat
gaacaaaaatattgccataagaaaatagtgtatgaaagtgcgattaatgg
tagactagtccaggtgatgaattaccgagatataatttttcttttcaaat
cgctgagttttgaaatcaaagccctagtaatattgtgtctagaccctgct
tactaatttagtttggagtagtgatataatagtaatattgtttgcaataa
gataaaatagactcgtaaattttaggattaactatattttacatcacaag
gtttggagatcgtttgcacaataagccacaaaattttgatttttatacat
attacaccacgtcatttcttaattacactaatttaattttccttcaattt
gatgttcgagatactataattgcataagtcttaacgaaacacttttggta
ctctttacttaacgttaaagacatttttattctaaaaagccactcctagt
actattcacttacaacatttttttgttctcaaagtttttaagtttttttc
attagttttttttttaattttttttaataatattataggaggaagtaggt
gtgctggcacatggattagcaagtgcagggtcaaagccagtgaacttagg
gcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatggtag
ggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggccgac
gagttcaaatccatggtggtggagatgatggtgttggctggcgttttcaa
catcggcgacttcatcccggccctcgagtggctggacttgcagggggtgg
cgggaaagatgaagaagctgcacaagaggttcgatgccttcttgaccgcc
attgttgaagaccacaagaggagcggcgaagggaagcacgtggacatgct
gacgacgttgctgtcgctcacggatgatgctgacggtgagggcgccaagc
tcacggacactgagattaaagctttgcttttggtacgtaggccctcttct
ctctctctctctctctctctcccttcatcattttgtttgaaccgttgcat
atgataacaaaaggatttatagtatagtttgactttgaggattttagaaa
aataagtattgtttgttttaataagtgaagtattttttttttcaaattat
tttcacttttcgtacactttttttattatctttgtgcttaacatttcttt
atcaacttgttcggtttagttattaaaagaaaagatgaacgctcaagaag
tgaaaatttgtcgttcataattattattttgaatttttatctctctttta
gacacttttttttcatttaatgttgttcatatgaagtgtaaaactatttt
atagtgtgtcaaaaatacttctgttaataaaaataaatcagaaatattat
taggacataaatacaactttccacaatttccccaaaatataaatttattt
atactaatttccccaatgttataagtttttactaattccctctgtagata
tgttttggtttttcagcaacctttcttgttggccagtggtgtccacgtca
tctttagtcacattactacaaaaagctattacactgacccacccataata
attttgatgcacacagaacatgttcacagctggcactgacacgtcatcaa
gcacggtggaatgggccatagcagaactccttcgccaccccaagattcta
gcccaactccaacaagagctggaccaagtagcggggcgggatcggctcat
aaccgagtcggacctgcctaacttgacctacctccaagcagtaatcaagg
aaacctttcggctacacccgtcaaccccgctctccctgcctcgaatggcg
tccgagagttgcgaaatcaacgggttccacatccccaagggtgccactct
tctggtcaacgtatgggccatatctcgcgacccggcccaatggtccgaac
cgcttgagtttagacccgagcggttcttgccgggtggagagaagcccaat
gtggacgtcaagggtaatgatttcgaggttataccgtttggggccgggcg
gagaatatgcgccgggatgacccttgggctgcgtatggtgtctctaatga
ccgcgaccctggtccatggttttgattggaccttggctgatgggctcaca
cctgagaaattgaacatggacgaggcttatgggctcacactacaaagagc
cgcaccattaatggtgcacccacgtaacaggctagcccctcatgcatata
atgcgtcatcaccttga

Coding sequence (CDS) from alignment at FJ919632:1069..4135+

>FJ919632.1-F3H.m1 ID=FJ919632.1-F3H.m1; Name=F3H; organism=Malus x domestica; type=CDS; length=1536bp; location=Sequence derived from: FJ919632:1069..4135+ (Malus x domestica
atgtttgttctcatattcttcaccgttgtcttggccttcttcttatacag
gctcttcgcccccggcgggagccgccacgctcagccccttccaccagggc
cgaaaccctggcctgtcgtgggaaacttgccccacttaggccccgttccc
catcactctctggcggcgttggcccgtcagtatggaccccttatgcacct
ccgcttggggttcgttgacgtggttgttgcagcctctgcttcggtggcgt
cacagttcttgaagacccacgacgccaatttctctagcagaccacccaac
tccggcgccaagcatctcgcttataactaccaggatttggtgttcgcgcc
gtacggtccacgatggcggatgttacggaagatcagctccgtccatttgt
tctccggcaaggctctcgatgatcttaaacatgttcgccaggaggaagta
ggtgtgctggcacatggattagcaagtgcagggtcaaagccagtgaactt
agggcagctactgaacgtgtgcacagtcaacgccctagggcgggtgatgg
tagggcggaggctcttcggagacggcggcgggcgcgaagaccagaaggcc
gacgagttcaaatccatggtggtggagatgatggtgttggctggcgtttt
caacatcggcgacttcatcccggccctcgagtggctggacttgcaggggg
tggcgggaaagatgaagaagctgcacaagaggttcgatgccttcttgacc
gccattgttgaagaccacaagaggagcggcgaagggaagcacgtggacat
gctgacgacgttgctgtcgctcacggatgatgctgacggtgagggcgcca
agctcacggacactgagattaaagctttgcttttgaacatgttcacagct
ggcactgacacgtcatcaagcacggtggaatgggccatagcagaactcct
tcgccaccccaagattctagcccaactccaacaagagctggaccaagtag
cggggcgggatcggctcataaccgagtcggacctgcctaacttgacctac
ctccaagcagtaatcaaggaaacctttcggctacacccgtcaaccccgct
ctccctgcctcgaatggcgtccgagagttgcgaaatcaacgggttccaca
tccccaagggtgccactcttctggtcaacgtatgggccatatctcgcgac
ccggcccaatggtccgaaccgcttgagtttagacccgagcggttcttgcc
gggtggagagaagcccaatgtggacgtcaagggtaatgatttcgaggtta
taccgtttggggccgggcggagaatatgcgccgggatgacccttgggctg
cgtatggtgtctctaatgaccgcgaccctggtccatggttttgattggac
cttggctgatgggctcacacctgagaaattgaacatggacgaggcttatg
ggctcacactacaaagagccgcaccattaatggtgcacccacgtaacagg
ctagcccctcatgcatataatgcgtcatcaccttga