MADS11, HM122613.1-MADS11.m1 (mRNA) Malus x domestica

Transcript Overview
NameMADS11
Unique NameHM122613.1-MADS11.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductMADS domain class transcription factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HM122613.1-MADS11.m1-cds1HM122613.1-MADS11.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MADS11HM122613.1-MADS11.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI302398915
nuccoreHM122613.1
Alignments
Feature NameTypeLocationAnalysis
HM122613 region HM122613:218..949+ NCBI Rosaceae gene and mRNA sequences
Chr02 chromosome Chr02:19111593..19116277- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>HM122613.1-MADS11.m1 ID=HM122613.1-MADS11.m1; Name=MADS11; organism=Malus x domestica; type=mRNA; length=732bp
atggggagggggagagtggagctgaagagaatagagaacaagattaacag
gcaggtgactttctcaaagaggagaaatggtttattgaagaaagcctatg
aactctctgtgctttgtgatgctgaggttggccttatcatcttctctagc
cgtggcaagctctatgagtttgccagcgctggtatgagcaaaacccttga
acgataccaacgttgctccttcactccacctgagaatagcattgaacgtg
aaacacagagctggtaccaagaagtcacaaaactgaaagctaaatatgaa
tcccttcagcgaactcaaaggcatttgcttggtgaagatcttggaccact
gagtgtgaaggagttgcaaaatcttgaaaaacaacttgaaggagctcttg
cacaaaccagacaaaggaagacacagcttatgattgaacaaatggaggac
ctgcgcaaaaaggagcgtcaccttggagacctcaacaagcagctgagggt
caagcttgaggcagaagggcagaatctgaatgtcattcaaaacatgtgga
gctcagatgcagcggctggaagtagcaacttttctttgcattcttcacaa
accaaccccatggactgtacacctgaacctgtcatacaaatgggatacca
tcagtatcatcctgctgagggatcatctattccaaggagcttgactggtg
agaccaacttcatccaaggatgggttctctga
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protein sequence of MADS11

>HM122613.1-MADS11.p1 ID=HM122613.1-MADS11.p1; Name=MADS11; organism=Malus x domestica; type=polypeptide; length=243bp
MGRGRVELKRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVGLIIFSS
RGKLYEFASAGMSKTLERYQRCSFTPPENSIERETQSWYQEVTKLKAKYE
SLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALAQTRQRKTQLMIEQMED
LRKKERHLGDLNKQLRVKLEAEGQNLNVIQNMWSSDAAAGSSNFSLHSSQ
TNPMDCTPEPVIQMGYHQYHPAEGSSIPRSLTGETNFIQGWVL
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mRNA from alignment at HM122613:218..949+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HM122613.1-MADS11.m1 ID=HM122613.1-MADS11.m1; Name=MADS11; organism=Malus x domestica; type=mRNA; length=732bp; location=Sequence derived from: HM122613:218..949+ (Malus x domestica
atggggagggggagagtggagctgaagagaatagagaacaagattaacag gcaggtgactttctcaaagaggagaaatggtttattgaagaaagcctatg aactctctgtgctttgtgatgctgaggttggccttatcatcttctctagc cgtggcaagctctatgagtttgccagcgctggtatgagcaaaacccttga acgataccaacgttgctccttcactccacctgagaatagcattgaacgtg aaacacagagctggtaccaagaagtcacaaaactgaaagctaaatatgaa tcccttcagcgaactcaaaggcatttgcttggtgaagatcttggaccact gagtgtgaaggagttgcaaaatcttgaaaaacaacttgaaggagctcttg cacaaaccagacaaaggaagacacagcttatgattgaacaaatggaggac ctgcgcaaaaaggagcgtcaccttggagacctcaacaagcagctgagggt caagcttgaggcagaagggcagaatctgaatgtcattcaaaacatgtgga gctcagatgcagcggctggaagtagcaacttttctttgcattcttcacaa accaaccccatggactgtacacctgaacctgtcatacaaatgggatacca tcagtatcatcctgctgagggatcatctattccaaggagcttgactggtg agaccaacttcatccaaggatgggttctctga
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Coding sequence (CDS) from alignment at HM122613:218..949+

>HM122613.1-MADS11.m1 ID=HM122613.1-MADS11.m1; Name=MADS11; organism=Malus x domestica; type=CDS; length=732bp; location=Sequence derived from: HM122613:218..949+ (Malus x domestica
atggggagggggagagtggagctgaagagaatagagaacaagattaacag
gcaggtgactttctcaaagaggagaaatggtttattgaagaaagcctatg
aactctctgtgctttgtgatgctgaggttggccttatcatcttctctagc
cgtggcaagctctatgagtttgccagcgctggtatgagcaaaacccttga
acgataccaacgttgctccttcactccacctgagaatagcattgaacgtg
aaacacagagctggtaccaagaagtcacaaaactgaaagctaaatatgaa
tcccttcagcgaactcaaaggcatttgcttggtgaagatcttggaccact
gagtgtgaaggagttgcaaaatcttgaaaaacaacttgaaggagctcttg
cacaaaccagacaaaggaagacacagcttatgattgaacaaatggaggac
ctgcgcaaaaaggagcgtcaccttggagacctcaacaagcagctgagggt
caagcttgaggcagaagggcagaatctgaatgtcattcaaaacatgtgga
gctcagatgcagcggctggaagtagcaacttttctttgcattcttcacaa
accaaccccatggactgtacacctgaacctgtcatacaaatgggatacca
tcagtatcatcctgctgagggatcatctattccaaggagcttgactggtg
agaccaacttcatccaaggatgggttctctga
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