MADS2, HM122603.1-MADS2.m1 (mRNA) Malus x domestica

Transcript Overview
NameMADS2
Unique NameHM122603.1-MADS2.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductMADS domain class transcription factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HM122603.1-MADS2.m1-cds1HM122603.1-MADS2.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MADS2HM122603.1-MADS2.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI302398895
nuccoreHM122603.1
Alignments
Feature NameTypeLocationAnalysis
HM122603 region HM122603:179..940+ NCBI Rosaceae gene and mRNA sequences
Chr14 chromosome Chr14:29952042..29957558+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr14 chromosome chr14:26876103..26881620- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr14 chromosome chr14:31494633..31500150+ Malus x domestica Whole Genome v1.0p Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>HM122603.1-MADS2.m1 ID=HM122603.1-MADS2.m1; Name=MADS2; organism=Malus x domestica; type=mRNA; length=762bp
atggggaggggaagggtgcagctgaagagaattgagaacaagatcaacag
gcaggtgaccttctcaaagagaaggtcggggctgatgaagaaagctcatg
agatttctgtgctttgtgatgctgaggttgctttgattatcttctccacc
aagggcaagctctttgagtactccaatgattcctgcatggaaaggatcct
ggaaaggtacgaaagatactcatatacagagaggcagcttcttgcaaatg
ataatgaatccactggaagctggactctggaacatgcaaagctcaaggct
agggtggaggttttacaaagaaatcaaagacactatatgggagaagatct
ccaatccttaagtctcaaagagcttcaaaatttagagcaacagcttgatt
ctgcactgaagcacataaggtcaagaaagaaccaagttatgtacgaatcg
atttctgagctccagaagaaggataaggcattgcaggagcaaaacaactt
gctggcaaagaaggagaaggagaacgcagtagctcaacaggcccaattgg
agcatgtgcaggagcagaggttgaactcctcttcctcccttcttccacgg
gcattgcagtccttgaatttcggcagcgggtccaattaccaggccattag
atcaagtgaaggaataccaggagataatcagcagtatggagatgaaaccc
caactccacatagacctaacatgctgctgcccgcttggatgctccgccac
cttaatgaatag
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protein sequence of MADS2

>HM122603.1-MADS2.p1 ID=HM122603.1-MADS2.p1; Name=MADS2; organism=Malus x domestica; type=polypeptide; length=253bp
MGRGRVQLKRIENKINRQVTFSKRRSGLMKKAHEISVLCDAEVALIIFST
KGKLFEYSNDSCMERILERYERYSYTERQLLANDNESTGSWTLEHAKLKA
RVEVLQRNQRHYMGEDLQSLSLKELQNLEQQLDSALKHIRSRKNQVMYES
ISELQKKDKALQEQNNLLAKKEKENAVAQQAQLEHVQEQRLNSSSSLLPR
ALQSLNFGSGSNYQAIRSSEGIPGDNQQYGDETPTPHRPNMLLPAWMLRH
LNE
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mRNA from alignment at HM122603:179..940+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HM122603.1-MADS2.m1 ID=HM122603.1-MADS2.m1; Name=MADS2; organism=Malus x domestica; type=mRNA; length=762bp; location=Sequence derived from: HM122603:179..940+ (Malus x domestica
atggggaggggaagggtgcagctgaagagaattgagaacaagatcaacag gcaggtgaccttctcaaagagaaggtcggggctgatgaagaaagctcatg agatttctgtgctttgtgatgctgaggttgctttgattatcttctccacc aagggcaagctctttgagtactccaatgattcctgcatggaaaggatcct ggaaaggtacgaaagatactcatatacagagaggcagcttcttgcaaatg ataatgaatccactggaagctggactctggaacatgcaaagctcaaggct agggtggaggttttacaaagaaatcaaagacactatatgggagaagatct ccaatccttaagtctcaaagagcttcaaaatttagagcaacagcttgatt ctgcactgaagcacataaggtcaagaaagaaccaagttatgtacgaatcg atttctgagctccagaagaaggataaggcattgcaggagcaaaacaactt gctggcaaagaaggagaaggagaacgcagtagctcaacaggcccaattgg agcatgtgcaggagcagaggttgaactcctcttcctcccttcttccacgg gcattgcagtccttgaatttcggcagcgggtccaattaccaggccattag atcaagtgaaggaataccaggagataatcagcagtatggagatgaaaccc caactccacatagacctaacatgctgctgcccgcttggatgctccgccac cttaatgaatag
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Coding sequence (CDS) from alignment at HM122603:179..940+

>HM122603.1-MADS2.m1 ID=HM122603.1-MADS2.m1; Name=MADS2; organism=Malus x domestica; type=CDS; length=762bp; location=Sequence derived from: HM122603:179..940+ (Malus x domestica
atggggaggggaagggtgcagctgaagagaattgagaacaagatcaacag
gcaggtgaccttctcaaagagaaggtcggggctgatgaagaaagctcatg
agatttctgtgctttgtgatgctgaggttgctttgattatcttctccacc
aagggcaagctctttgagtactccaatgattcctgcatggaaaggatcct
ggaaaggtacgaaagatactcatatacagagaggcagcttcttgcaaatg
ataatgaatccactggaagctggactctggaacatgcaaagctcaaggct
agggtggaggttttacaaagaaatcaaagacactatatgggagaagatct
ccaatccttaagtctcaaagagcttcaaaatttagagcaacagcttgatt
ctgcactgaagcacataaggtcaagaaagaaccaagttatgtacgaatcg
atttctgagctccagaagaaggataaggcattgcaggagcaaaacaactt
gctggcaaagaaggagaaggagaacgcagtagctcaacaggcccaattgg
agcatgtgcaggagcagaggttgaactcctcttcctcccttcttccacgg
gcattgcagtccttgaatttcggcagcgggtccaattaccaggccattag
atcaagtgaaggaataccaggagataatcagcagtatggagatgaaaccc
caactccacatagacctaacatgctgctgcccgcttggatgctccgccac
cttaatgaatag
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