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Transcript Overview
Name | MADS2 |
Unique Name | HM122603.1-MADS2.m1 |
Type | mRNA |
Organism | Malus x domestica (Apple) |
Source | genbank |
Product | MADS domain class transcription factor |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
HM122603.1-MADS2.m1-cds1 | HM122603.1-MADS2.m1-cds1 | Malus x domestica | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
MADS2 | HM122603.1-MADS2.p1 | Malus x domestica | polypeptide |
Cross References
External references for this mRNA
Alignments
Feature Name | Type | Location | Analysis |
HM122603 |
region |
HM122603:179..940+ |
NCBI Rosaceae gene and mRNA sequences |
Chr14 |
chromosome |
Chr14:29952042..29957558+ |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
chr14 |
chromosome |
chr14:26876103..26881620- |
Malus x domestica Whole Genome v1.0 Assembly & Annotation |
chr14 |
chromosome |
chr14:31494633..31500150+ |
Malus x domestica Whole Genome v1.0p Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >HM122603.1-MADS2.m1 ID=HM122603.1-MADS2.m1; Name=MADS2; organism=Malus x domestica; type=mRNA; length=762bp atggggaggggaagggtgcagctgaagagaattgagaacaagatcaacag gcaggtgaccttctcaaagagaaggtcggggctgatgaagaaagctcatg agatttctgtgctttgtgatgctgaggttgctttgattatcttctccacc aagggcaagctctttgagtactccaatgattcctgcatggaaaggatcct ggaaaggtacgaaagatactcatatacagagaggcagcttcttgcaaatg ataatgaatccactggaagctggactctggaacatgcaaagctcaaggct agggtggaggttttacaaagaaatcaaagacactatatgggagaagatct ccaatccttaagtctcaaagagcttcaaaatttagagcaacagcttgatt ctgcactgaagcacataaggtcaagaaagaaccaagttatgtacgaatcg atttctgagctccagaagaaggataaggcattgcaggagcaaaacaactt gctggcaaagaaggagaaggagaacgcagtagctcaacaggcccaattgg agcatgtgcaggagcagaggttgaactcctcttcctcccttcttccacgg gcattgcagtccttgaatttcggcagcgggtccaattaccaggccattag atcaagtgaaggaataccaggagataatcagcagtatggagatgaaaccc caactccacatagacctaacatgctgctgcccgcttggatgctccgccac cttaatgaatag back to topprotein sequence of MADS2 >HM122603.1-MADS2.p1 ID=HM122603.1-MADS2.p1; Name=MADS2; organism=Malus x domestica; type=polypeptide; length=253bp MGRGRVQLKRIENKINRQVTFSKRRSGLMKKAHEISVLCDAEVALIIFST KGKLFEYSNDSCMERILERYERYSYTERQLLANDNESTGSWTLEHAKLKA RVEVLQRNQRHYMGEDLQSLSLKELQNLEQQLDSALKHIRSRKNQVMYES ISELQKKDKALQEQNNLLAKKEKENAVAQQAQLEHVQEQRLNSSSSLLPR ALQSLNFGSGSNYQAIRSSEGIPGDNQQYGDETPTPHRPNMLLPAWMLRH LNE back to topmRNA from alignment at HM122603:179..940+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >HM122603.1-MADS2.m1 ID=HM122603.1-MADS2.m1; Name=MADS2; organism=Malus x domestica; type=mRNA; length=762bp; location=Sequence derived from: HM122603:179..940+ (Malus x domestica atggggaggggaagggtgcagctgaagagaattgagaacaagatcaacag
gcaggtgaccttctcaaagagaaggtcggggctgatgaagaaagctcatg
agatttctgtgctttgtgatgctgaggttgctttgattatcttctccacc
aagggcaagctctttgagtactccaatgattcctgcatggaaaggatcct
ggaaaggtacgaaagatactcatatacagagaggcagcttcttgcaaatg
ataatgaatccactggaagctggactctggaacatgcaaagctcaaggct
agggtggaggttttacaaagaaatcaaagacactatatgggagaagatct
ccaatccttaagtctcaaagagcttcaaaatttagagcaacagcttgatt
ctgcactgaagcacataaggtcaagaaagaaccaagttatgtacgaatcg
atttctgagctccagaagaaggataaggcattgcaggagcaaaacaactt
gctggcaaagaaggagaaggagaacgcagtagctcaacaggcccaattgg
agcatgtgcaggagcagaggttgaactcctcttcctcccttcttccacgg
gcattgcagtccttgaatttcggcagcgggtccaattaccaggccattag
atcaagtgaaggaataccaggagataatcagcagtatggagatgaaaccc
caactccacatagacctaacatgctgctgcccgcttggatgctccgccac
cttaatgaatag back to topCoding sequence (CDS) from alignment at HM122603:179..940+ >HM122603.1-MADS2.m1 ID=HM122603.1-MADS2.m1; Name=MADS2; organism=Malus x domestica; type=CDS; length=762bp; location=Sequence derived from: HM122603:179..940+ (Malus x domestica atggggaggggaagggtgcagctgaagagaattgagaacaagatcaacag gcaggtgaccttctcaaagagaaggtcggggctgatgaagaaagctcatg agatttctgtgctttgtgatgctgaggttgctttgattatcttctccacc aagggcaagctctttgagtactccaatgattcctgcatggaaaggatcct ggaaaggtacgaaagatactcatatacagagaggcagcttcttgcaaatg ataatgaatccactggaagctggactctggaacatgcaaagctcaaggct agggtggaggttttacaaagaaatcaaagacactatatgggagaagatct ccaatccttaagtctcaaagagcttcaaaatttagagcaacagcttgatt ctgcactgaagcacataaggtcaagaaagaaccaagttatgtacgaatcg atttctgagctccagaagaaggataaggcattgcaggagcaaaacaactt gctggcaaagaaggagaaggagaacgcagtagctcaacaggcccaattgg agcatgtgcaggagcagaggttgaactcctcttcctcccttcttccacgg gcattgcagtccttgaatttcggcagcgggtccaattaccaggccattag atcaagtgaaggaataccaggagataatcagcagtatggagatgaaaccc caactccacatagacctaacatgctgctgcccgcttggatgctccgccac cttaatgaatag back to top
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