MADS14, HM122598.1-MADS14.m1 (mRNA) Malus x domestica

Transcript Overview


Name	MADS14
Unique Name	HM122598.1-MADS14.m1
Type	mRNA
Organism	Malus x domestica (Apple)
Source	genbank
Product	MADS domain class transcription factor

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
NCBI Rosaceae gene and mRNA sequences	2021-06-03

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
HM122598.1-MADS14.m1-cds1	HM122598.1-MADS14.m1-cds1	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MADS14	HM122598.1-MADS14.p1	Malus x domestica	polypeptide

Cross References

External references for this mRNA


Database	Accession
GI	302398885
nuccore	HM122598.1

Alignments

Feature Name	Type	Location	Analysis
HM122598	region	HM122598:151..879+	NCBI Rosaceae gene and mRNA sequences
Chr09	chromosome	Chr09:12332231..12338090-	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr9	chromosome	chr9:12045065..12051163-	Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr9	chromosome	chr9:12629771..12635869-	Malus x domestica Whole Genome v1.0p Assembly & Annotation

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at HM122598:151..879+
coding sequence from alignment at HM122598:151..879+

mRNA sequence

>HM122598.1-MADS14.m1 ID=HM122598.1-MADS14.m1; Name=MADS14; organism=Malus x domestica; type=mRNA; length=729bp
atggagttcgcaaatcaagcacctgagagctctacccaaaaaaaattggg
aagaggcaaaattgagattaagcggatcgaaaacactaccaatcgacaag
tcaccttctgcaaacgccgcaacggattgcttaagaaagcctatgaattg
tctgttctttgtgatgctgaagttgctcttatcgtcttctccacccgtgg
ccgcctctatgagtatgctaacaacagcgttagagcaacaatcgacaggt
acaaaaaagcatgcgctgattctacggacggtggatctgtatcagaagct
aacactcagttttatcagcaggaagcatcaaaactgcgaagacagatccg
agaaattcagaattcaaacaggcatatactgggggaatcccttagcacct
tgaaagtcaaggaactgaaaaacctagaaggaagattggagaaaggaatc
agcagaataagatccaaaaagaatgaaatcctgttttctgaaatcgaatt
catgcaaaagagggagactgagctgcaacaccacaacaattttctgagag
caaagatagctgaaagcgagagggaacagcagcagcagcaaacacatatg
atgccgggaacttcctacgatccgtcgatgccttcgaattcgtatgacag
gaacttcttccctgtgatcttggagtccaataataaccattaccctcgcc
aaggccagacagctctccaacttgtttga

protein sequence of MADS14

>HM122598.1-MADS14.p1 ID=HM122598.1-MADS14.p1; Name=MADS14; organism=Malus x domestica; type=polypeptide; length=242bp
MEFANQAPESSTQKKLGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYEL
SVLCDAEVALIVFSTRGRLYEYANNSVRATIDRYKKACADSTDGGSVSEA
NTQFYQQEASKLRRQIREIQNSNRHILGESLSTLKVKELKNLEGRLEKGI
SRIRSKKNEILFSEIEFMQKRETELQHHNNFLRAKIAESEREQQQQQTHM
MPGTSYDPSMPSNSYDRNFFPVILESNNNHYPRQGQTALQLV

mRNA from alignment at HM122598:151..879+

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>HM122598.1-MADS14.m1 ID=HM122598.1-MADS14.m1; Name=MADS14; organism=Malus x domestica; type=mRNA; length=729bp; location=Sequence derived from: HM122598:151..879+ (Malus x domestica
atggagttcgcaaatcaagcacctgagagctctacccaaaaaaaattggg
aagaggcaaaattgagattaagcggatcgaaaacactaccaatcgacaag
tcaccttctgcaaacgccgcaacggattgcttaagaaagcctatgaattg
tctgttctttgtgatgctgaagttgctcttatcgtcttctccacccgtgg
ccgcctctatgagtatgctaacaacagcgttagagcaacaatcgacaggt
acaaaaaagcatgcgctgattctacggacggtggatctgtatcagaagct
aacactcagttttatcagcaggaagcatcaaaactgcgaagacagatccg
agaaattcagaattcaaacaggcatatactgggggaatcccttagcacct
tgaaagtcaaggaactgaaaaacctagaaggaagattggagaaaggaatc
agcagaataagatccaaaaagaatgaaatcctgttttctgaaatcgaatt
catgcaaaagagggagactgagctgcaacaccacaacaattttctgagag
caaagatagctgaaagcgagagggaacagcagcagcagcaaacacatatg
atgccgggaacttcctacgatccgtcgatgccttcgaattcgtatgacag
gaacttcttccctgtgatcttggagtccaataataaccattaccctcgcc
aaggccagacagctctccaacttgtttga

Coding sequence (CDS) from alignment at HM122598:151..879+

>HM122598.1-MADS14.m1 ID=HM122598.1-MADS14.m1; Name=MADS14; organism=Malus x domestica; type=CDS; length=729bp; location=Sequence derived from: HM122598:151..879+ (Malus x domestica
atggagttcgcaaatcaagcacctgagagctctacccaaaaaaaattggg
aagaggcaaaattgagattaagcggatcgaaaacactaccaatcgacaag
tcaccttctgcaaacgccgcaacggattgcttaagaaagcctatgaattg
tctgttctttgtgatgctgaagttgctcttatcgtcttctccacccgtgg
ccgcctctatgagtatgctaacaacagcgttagagcaacaatcgacaggt
acaaaaaagcatgcgctgattctacggacggtggatctgtatcagaagct
aacactcagttttatcagcaggaagcatcaaaactgcgaagacagatccg
agaaattcagaattcaaacaggcatatactgggggaatcccttagcacct
tgaaagtcaaggaactgaaaaacctagaaggaagattggagaaaggaatc
agcagaataagatccaaaaagaatgaaatcctgttttctgaaatcgaatt
catgcaaaagagggagactgagctgcaacaccacaacaattttctgagag
caaagatagctgaaagcgagagggaacagcagcagcagcaaacacatatg
atgccgggaacttcctacgatccgtcgatgccttcgaattcgtatgacag
gaacttcttccctgtgatcttggagtccaataataaccattaccctcgcc
aaggccagacagctctccaacttgtttga