DOF8, HM122549.1-DOF8.m1 (mRNA) Malus x domestica

Transcript Overview
NameDOF8
Unique NameHM122549.1-DOF8.m1
TypemRNA
OrganismMalus x domestica (Apple)
Sourcegenbank
ProductDOF domain class transcription factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2021-06-03
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HM122549.1-DOF8.m1-cds1HM122549.1-DOF8.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
DOF8HM122549.1-DOF8.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI302398787
nuccoreHM122549.1
Alignments
Feature NameTypeLocationAnalysis
HM122549 region HM122549:149..1054+ NCBI Rosaceae gene and mRNA sequences
Chr12 chromosome Chr12:9562311..9563216- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr12 chromosome chr12:25429366..25430271+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
Sequences
The following sequences are available for this feature:

mRNA sequence

>HM122549.1-DOF8.m1 ID=HM122549.1-DOF8.m1; Name=DOF8; organism=Malus x domestica; type=mRNA; length=906bp
atggcagatcgagctcgcatggccaacatccccctccctgagcaagcact
aaaatgtccgcggtgcgaatccaccaacactaagttctgctacttcaaca
actacagcctcacacagccccgccacttctgcaagacttgtagaaggtac
tggacgagaggcggggccctgcgaaatgttccagttggcggcggctgcag
gagaaacaaaaggagcaaaggaaccagtagcagcgcctccaagtccccag
ccagcagctcggacaggccaaccggttcggccggttcgtcgggccacgca
aatttagggttaaacaacagtagcacggccggctcggcggataataataa
catgaggatgagcccgcacatcccaccgctgcgtttcatgtctcctttct
ccaccgacatggccttaaatttcggcatgatgaacaataataatagcagt
aattatggagttggagacttgaatggttttcatcagatggggagtggtct
aggagctagcggtggatcgctctttactttccagcagcagacgccgtcat
ttccgttcatggccgggttggatcctacgccggcggggcttatgttcgag
agcagcggagttgaggtaccggggtataatcaggtgcggccgagagtacc
gtttgctgggatgagtatatctcaaatggcttcggtgaagatggaattag
aaagtcagcagcaacaacaacagaatcaggagttgaatttgtcgaggcag
ttgttggggatgaataataattcaggaaatgatcagttctggagtaatgg
cagcggccgcggcagtggtggttctagtactactactgcatggactgatc
atttggggtttaaccctacttccactactagcaataatattaacaatccc
ctataa
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protein sequence of DOF8

>HM122549.1-DOF8.p1 ID=HM122549.1-DOF8.p1; Name=DOF8; organism=Malus x domestica; type=polypeptide; length=301bp
MADRARMANIPLPEQALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRY
WTRGGALRNVPVGGGCRRNKRSKGTSSSASKSPASSSDRPTGSAGSSGHA
NLGLNNSSTAGSADNNNMRMSPHIPPLRFMSPFSTDMALNFGMMNNNNSS
NYGVGDLNGFHQMGSGLGASGGSLFTFQQQTPSFPFMAGLDPTPAGLMFE
SSGVEVPGYNQVRPRVPFAGMSISQMASVKMELESQQQQQQNQELNLSRQ
LLGMNNNSGNDQFWSNGSGRGSGGSSTTTAWTDHLGFNPTSTTSNNINNP
L
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mRNA from alignment at HM122549:149..1054+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HM122549.1-DOF8.m1 ID=HM122549.1-DOF8.m1; Name=DOF8; organism=Malus x domestica; type=mRNA; length=906bp; location=Sequence derived from: HM122549:149..1054+ (Malus x domestica
atggcagatcgagctcgcatggccaacatccccctccctgagcaagcact aaaatgtccgcggtgcgaatccaccaacactaagttctgctacttcaaca actacagcctcacacagccccgccacttctgcaagacttgtagaaggtac tggacgagaggcggggccctgcgaaatgttccagttggcggcggctgcag gagaaacaaaaggagcaaaggaaccagtagcagcgcctccaagtccccag ccagcagctcggacaggccaaccggttcggccggttcgtcgggccacgca aatttagggttaaacaacagtagcacggccggctcggcggataataataa catgaggatgagcccgcacatcccaccgctgcgtttcatgtctcctttct ccaccgacatggccttaaatttcggcatgatgaacaataataatagcagt aattatggagttggagacttgaatggttttcatcagatggggagtggtct aggagctagcggtggatcgctctttactttccagcagcagacgccgtcat ttccgttcatggccgggttggatcctacgccggcggggcttatgttcgag agcagcggagttgaggtaccggggtataatcaggtgcggccgagagtacc gtttgctgggatgagtatatctcaaatggcttcggtgaagatggaattag aaagtcagcagcaacaacaacagaatcaggagttgaatttgtcgaggcag ttgttggggatgaataataattcaggaaatgatcagttctggagtaatgg cagcggccgcggcagtggtggttctagtactactactgcatggactgatc atttggggtttaaccctacttccactactagcaataatattaacaatccc ctataa
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Coding sequence (CDS) from alignment at HM122549:149..1054+

>HM122549.1-DOF8.m1 ID=HM122549.1-DOF8.m1; Name=DOF8; organism=Malus x domestica; type=CDS; length=906bp; location=Sequence derived from: HM122549:149..1054+ (Malus x domestica
atggcagatcgagctcgcatggccaacatccccctccctgagcaagcact
aaaatgtccgcggtgcgaatccaccaacactaagttctgctacttcaaca
actacagcctcacacagccccgccacttctgcaagacttgtagaaggtac
tggacgagaggcggggccctgcgaaatgttccagttggcggcggctgcag
gagaaacaaaaggagcaaaggaaccagtagcagcgcctccaagtccccag
ccagcagctcggacaggccaaccggttcggccggttcgtcgggccacgca
aatttagggttaaacaacagtagcacggccggctcggcggataataataa
catgaggatgagcccgcacatcccaccgctgcgtttcatgtctcctttct
ccaccgacatggccttaaatttcggcatgatgaacaataataatagcagt
aattatggagttggagacttgaatggttttcatcagatggggagtggtct
aggagctagcggtggatcgctctttactttccagcagcagacgccgtcat
ttccgttcatggccgggttggatcctacgccggcggggcttatgttcgag
agcagcggagttgaggtaccggggtataatcaggtgcggccgagagtacc
gtttgctgggatgagtatatctcaaatggcttcggtgaagatggaattag
aaagtcagcagcaacaacaacagaatcaggagttgaatttgtcgaggcag
ttgttggggatgaataataattcaggaaatgatcagttctggagtaatgg
cagcggccgcggcagtggtggttctagtactactactgcatggactgatc
atttggggtttaaccctacttccactactagcaataatattaacaatccc
ctataa
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