Apple_HCGA_F1

Map Overview

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NameApple_HCGA_F1
SpeciesMalus x domestica
SoftwareJoinmap4.1
Population typeF1
Map typegenetic
Map unitcM
Paternal parentTwin Bee Gala
Population size125
Number of loci1042
Number of linkage groups17
Publication[view all]
ContactJames Luby
Stock
NameTypeDetails
Honeycrisp_x_Twin Bee Gala-F1population
Origin detail:University of Minnesota
Population size:125
Contact
NameDetails
James Luby
First name:James
Last name:Luby
Institution:Department of Horticultural Science, University of Minnesota, St. Paul, MN
Address:St Paul, MN 55104
Country:United States
Email:lubyx001@umn.edu
Map Loci
This map contains 1,042 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple_HCGA_F1.1RosBREEDSNP_SNP_TC_35468899_Lg1_02092_MAF50_138030_exon2SNP_TC_35468899_Lg1_02092_MAF50_138030_exon2marker_locus0 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1SNP_CT_35202609_Lg1_00495_MAF50_361322_exon1marker_locus2.46 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_CT_35251020_Lg1_00495_MAF50_1650375_exon3SNP_CT_35251020_Lg1_00495_MAF50_1650375_exon3marker_locus2.46 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_TC_35236523_Lg1_00495_MAF40_1666199_exon3SNP_TC_35236523_Lg1_00495_MAF40_1666199_exon3marker_locus2.46 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AG_35192538_Lg1_00495_MAF30_MDP0000302199_exon5SNP_AG_35192538_Lg1_00495_MAF30_MDP0000302199_exon5marker_locus2.46 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_TG_34487221_Lg1_02371_MAF10_MDP0000194123_exon7SNP_TG_34487221_Lg1_02371_MAF10_MDP0000194123_exon7marker_locus4.09 cM
Apple_HCGA_F1.1GDsnp02371GDsnp02371marker_locus4.09 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AC_34510440_Lg1_02371_MAF50_1642607_exon7SNP_AC_34510440_Lg1_02371_MAF50_1642607_exon7marker_locus4.09 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AG_34453757_Lg1_02371_MAF20_MDP0000286439_exon1SNP_AG_34453757_Lg1_02371_MAF20_MDP0000286439_exon1marker_locus4.89 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_CT_34470881_Lg1_02371_MAF20_566613_exon1SNP_CT_34470881_Lg1_02371_MAF20_566613_exon1marker_locus4.89 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1SNP_CT_33663934_Lg1_01371_MAF50_328159_exon1marker_locus9.06 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_GA_31945251_Lg1_RosCOS2794_MAF40_1665084_exon1SNP_GA_31945251_Lg1_RosCOS2794_MAF40_1665084_exon1marker_locus9.06 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_GA_31531477_Lg1_327214_MAF40_327214_exon1SNP_GA_31531477_Lg1_327214_MAF40_327214_exon1marker_locus10.69 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AC_31531408_Lg1_327214_MAF30_327214_exon1SNP_AC_31531408_Lg1_327214_MAF30_327214_exon1marker_locus10.69 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AG_31626705_Lg1_00583_MAF40_MDP0000288458_exon4SNP_AG_31626705_Lg1_00583_MAF40_MDP0000288458_exon4marker_locus10.69 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_CT_31642444_Lg1_00583_MAF50_178942_exon1SNP_CT_31642444_Lg1_00583_MAF50_178942_exon1marker_locus10.69 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AG_31359569_Lg1_327822__327822_exon5SNP_AG_31359569_Lg1_327822__327822_exon5marker_locus13.15 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_GA_31359482_Lg1_327822_MAF50_327822_exon5SNP_GA_31359482_Lg1_327822_MAF50_327822_exon5marker_locus13.15 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1SNP_AC_30590177_Lg1_136617_MAF30_136617_exon1marker_locus13.15 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AG_30494924_Lg1_250444__250444_exon2SNP_AG_30494924_Lg1_250444__250444_exon2marker_locus13.95 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_AC_30246914_Lg1_CXE4_MAF50_MDP0000473154_exon2SNP_AC_30246914_Lg1_CXE4_MAF50_MDP0000473154_exon2marker_locus14.76 cM
Apple_HCGA_F1.1GDsnp00782GDsnp00782marker_locus14.76 cM
Apple_HCGA_F1.1GDsnp10005GDsnp10005marker_locus17.22 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_GA_26741011_Lg1_01228_MAF30_53996_exon1SNP_GA_26741011_Lg1_01228_MAF30_53996_exon1marker_locus18.85 cM
Apple_HCGA_F1.1RosBREEDSNP_SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1SNP_GA_27072261_Lg1_01693_MAF20_MDP0000165729_exon1marker_locus18.85 cM
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