Apple_HCGA_F1

Map Overview

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NameApple_HCGA_F1
SpeciesMalus x domestica
SoftwareJoinmap4.1
Population typeF1
Map typegenetic
Map unitcM
Paternal parentTwin Bee Gala
Population size125
Number of loci1042
Number of linkage groups17
Publication[view all]
ContactJames Luby
Stock
NameTypeDetails
Honeycrisp_x_Twin Bee Gala-F1population
Origin detail:University of Minnesota
Population size:125
Contact
NameDetails
James Luby
First name:James
Last name:Luby
Institution:Department of Horticultural Science, University of Minnesota, St. Paul, MN
Address:St Paul, MN 55104
Country:United States
Email:lubyx001@umn.edu
Map Loci
This map contains 1,042 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple_HCGA_F1.15RosBREEDSNP_SNP_CT_976750_Lg15_00694_MAF50_598335_exon1SNP_CT_976750_Lg15_00694_MAF50_598335_exon1marker_locus16.98 cM
Apple_HCGA_F1.15GDsnp00694GDsnp00694marker_locus16.98 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_GA_1098793_Lg15_01009_MAF30_84788_exon1SNP_GA_1098793_Lg15_01009_MAF30_84788_exon1marker_locus16.98 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_TC_1451208_Lg15_MDP0000227096_MAF50_MDP0000227096_exon6SNP_TC_1451208_Lg15_MDP0000227096_MAF50_MDP0000227096_exon6marker_locus18.61 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_GA_1451232_Lg15_MDP0000227096__MDP0000227096_exon6SNP_GA_1451232_Lg15_MDP0000227096__MDP0000227096_exon6marker_locus18.61 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_TC_33384204_Lg3_285981_MAF20_285981_exon19SNP_TC_33384204_Lg3_285981_MAF20_285981_exon19marker_locus27.33 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_GT_33384748_Lg3_MDP0000126553_MAF20_MDP0000126553_exon18SNP_GT_33384748_Lg3_MDP0000126553_MAF20_MDP0000126553_exon18marker_locus27.33 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_CT_3046222_Lg15_01814_MAF20_480291_exon1SNP_CT_3046222_Lg15_01814_MAF20_480291_exon1marker_locus27.33 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_TG_3558718_Lg15_01047_MAF40_674936_exon1SNP_TG_3558718_Lg15_01047_MAF40_674936_exon1marker_locus28.13 cM
Apple_HCGA_F1.15GDsnp00134GDsnp00134marker_locus28.13 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_CT_5937629_Lg15_CXE2_MAF20_1674901_exon1SNP_CT_5937629_Lg15_CXE2_MAF20_1674901_exon1marker_locus32.3 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_AG_6300357_Lg15_108706__108706_exon1SNP_AG_6300357_Lg15_108706__108706_exon1marker_locus35.61 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_CT_6300421_Lg15_108706_MAF10_108706_exon1SNP_CT_6300421_Lg15_108706_MAF10_108706_exon1marker_locus35.61 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_TC_6300431_Lg15_108706_MAF10_108706_exon1SNP_TC_6300431_Lg15_108706_MAF10_108706_exon1marker_locus35.61 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_AC_6637190_Lg15_MDP0000156137_MAF30_MDP0000156137_exon1SNP_AC_6637190_Lg15_MDP0000156137_MAF30_MDP0000156137_exon1marker_locus37.24 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_GA_7273686_Lg15_00274_MAF20_876795_exon1SNP_GA_7273686_Lg15_00274_MAF20_876795_exon1marker_locus37.24 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_CT_7261398_Lg15_00274_MAF50_213486_exon1SNP_CT_7261398_Lg15_00274_MAF50_213486_exon1marker_locus37.24 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_GA_6636944_Lg15_MDP0000156137_MAF40_MDP0000156137_exon1SNP_GA_6636944_Lg15_MDP0000156137_MAF40_MDP0000156137_exon1marker_locus37.24 cM
Apple_HCGA_F1.15GDsnp00796GDsnp00796marker_locus39.7 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_CT_11089972_Lg15_02869_MAF30_MDP0000449737_exon4SNP_CT_11089972_Lg15_02869_MAF30_MDP0000449737_exon4marker_locus45.64 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_AC_11070621_Lg15_02869_MAF40_7599_exon1SNP_AC_11070621_Lg15_02869_MAF40_7599_exon1marker_locus45.64 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_GA_11092150_Lg15_02869_MAF40_MDP0000449737_exon1SNP_GA_11092150_Lg15_02869_MAF40_MDP0000449737_exon1marker_locus45.64 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_CA_11859098_Lg15_MDP0000320360_MAF40_MDP0000320360_exon2SNP_CA_11859098_Lg15_MDP0000320360_MAF40_MDP0000320360_exon2marker_locus45.64 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_CT_11858781_Lg15_MDP0000320360_MAF40_MDP0000320360_exon2SNP_CT_11858781_Lg15_MDP0000320360_MAF40_MDP0000320360_exon2marker_locus45.64 cM
Apple_HCGA_F1.15RosBREEDSNP_SNP_GA_11858982_Lg15_MDP0000320360_MAF30_MDP0000320360_exon2SNP_GA_11858982_Lg15_MDP0000320360_MAF30_MDP0000320360_exon2marker_locus45.64 cM
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