Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.12	MdSNPui01524	MdSNPui01524	marker_locus	33.83 cM
Apple-C16xC17-F1-2012.12	CTG1057656	CTG1057656	marker_locus	35.15 cM
Apple-C16xC17-F1-2012.12	Hi03b03	Hi03b03	marker_locus	35.87 cM
Apple-C16xC17-F1-2012.12	BACSSR2	BACSSR2	marker_locus	36.73 cM
Apple-C16xC17-F1-2012.12	CTG1065053	CTG1065053	marker_locus	37.7 cM
Apple-C16xC17-F1-2012.12	CTG1076206-2	CTG1076206-2	marker_locus	38.61 cM
Apple-C16xC17-F1-2012.12	MdSNPui00015	MdSNPui00015	marker_locus	40.24 cM
Apple-C16xC17-F1-2012.12	GDsnp00883	GDsnp00883	marker_locus	42.98 cM
Apple-C16xC17-F1-2012.12	CTG1066003	CTG1066003	marker_locus	45.68 cM
Apple-C16xC17-F1-2012.12	CTG1072632	CTG1072632	marker_locus	45.87 cM
Apple-C16xC17-F1-2012.12	CTG1071851	CTG1071851	marker_locus	56.26 cM
Apple-C16xC17-F1-2012.12	CV082939	CV082939	marker_locus	56.79 cM
Apple-C16xC17-F1-2012.12	GDsnp00334	GDsnp00334	marker_locus	60.8 cM
Apple-C16xC17-F1-2012.12	GDsnp00937	GDsnp00937	marker_locus	60.8 cM
Apple-C16xC17-F1-2012.12	MdSNPui11532	MdSNPui11532	marker_locus	61.07 cM
Apple-C16xC17-F1-2012.12	GDsnp01568	GDsnp01568	marker_locus	61.72 cM
Apple-C16xC17-F1-2012.12	GDsnp00925	GDsnp00925	marker_locus	63.38 cM
Apple-C16xC17-F1-2012.12	MdSNPui03582	MdSNPui03582	marker_locus	64.46 cM
Apple-C16xC17-F1-2012.12	GDsnp02228	GDsnp02228	marker_locus	64.46 cM
Apple-C16xC17-F1-2012.12	MdSNPui00998	MdSNPui00998	marker_locus	65.43 cM
Apple-C16xC17-F1-2012.12	GDsnp00653	GDsnp00653	marker_locus	65.63 cM
Apple-C16xC17-F1-2012.12	snpCN899883	snpCN899883	marker_locus	65.63 cM
Apple-C16xC17-F1-2012.12	GDsnp00338	GDsnp00338	marker_locus	67.28 cM
Apple-C16xC17-F1-2012.12	GDsnp02152	GDsnp02152	marker_locus	67.28 cM
Apple-C16xC17-F1-2012.12	GDsnp01523	GDsnp01523	marker_locus	67.28 cM

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