Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.13	MdSNPui06698	MdSNPui06698	marker_locus	68.3 cM
Apple-C16xC17-F1-2012.13	MdSNPui10418	MdSNPui10418	marker_locus	69.5 cM
Apple-C16xC17-F1-2012.13	MdSNPui05503	MdSNPui05503	marker_locus	69.51 cM
Apple-C16xC17-F1-2012.13	GDsnp00770	GDsnp00770	marker_locus	70.69 cM
Apple-C16xC17-F1-2012.13	CN937766	CN937766	marker_locus	73.26 cM
Apple-C16xC17-F1-2012.13	CH05c04	CH05c04	marker_locus	74.83 cM
Apple-C16xC17-F1-2012.14	MdSNPui03980	MdSNPui03980	marker_locus	0 cM
Apple-C16xC17-F1-2012.14	MdSNPui10142	MdSNPui10142	marker_locus	0 cM
Apple-C16xC17-F1-2012.14	MdSNPui03981	MdSNPui03981	marker_locus	0 cM
Apple-C16xC17-F1-2012.14	MdSNPui11447	MdSNPui11447	marker_locus	4.94 cM
Apple-C16xC17-F1-2012.14	MdSNPui03232	MdSNPui03232	marker_locus	11.58 cM
Apple-C16xC17-F1-2012.14	MdSNPui03233	MdSNPui03233	marker_locus	11.58 cM
Apple-C16xC17-F1-2012.14	MdSNPui06049	MdSNPui06049	marker_locus	13.28 cM
Apple-C16xC17-F1-2012.14	MdSNPui09844	MdSNPui09844	marker_locus	14.45 cM
Apple-C16xC17-F1-2012.14	MdSNPui07993	MdSNPui07993	marker_locus	15.58 cM
Apple-C16xC17-F1-2012.14	CN919375	CN919375	marker_locus	21.13 cM
Apple-C16xC17-F1-2012.14	CTG1065391	CTG1065391	marker_locus	22.72 cM
Apple-C16xC17-F1-2012.14	MdSNPui07992	MdSNPui07992	marker_locus	24.48 cM
Apple-C16xC17-F1-2012.14	CTG1059114	CTG1059114	marker_locus	25.1 cM
Apple-C16xC17-F1-2012.14	MdSNPui09720	MdSNPui09720	marker_locus	31.97 cM
Apple-C16xC17-F1-2012.14	MdSNPui09721	MdSNPui09721	marker_locus	32.03 cM
Apple-C16xC17-F1-2012.14	MdSNPui04131	MdSNPui04131	marker_locus	34.09 cM
Apple-C16xC17-F1-2012.14	MdSNPui04130	MdSNPui04130	marker_locus	34.09 cM
Apple-C16xC17-F1-2012.14	CTG1064671	CTG1064671	marker_locus	37.37 cM
Apple-C16xC17-F1-2012.14	CH01e01	CH01e01	marker_locus	38.79 cM

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