Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.10	AF057134-SSR	AF057134-ssr	marker_locus	86.19 cM
Apple-C16xC17-F1-2012.10	AF057134-SSR	AF057134-SSR	marker_locus	86.19 cM
Apple-C16xC17-F1-2012.10	CN884700	CN884700	marker_locus	88.27 cM
Apple-C16xC17-F1-2012.10	CTG1062183	CTG1062183	marker_locus	88.48 cM
Apple-C16xC17-F1-2012.10	MdSNPui00408	MdSNPui00408	marker_locus	89.34 cM
Apple-C16xC17-F1-2012.10	CTG1062704	CTG1062704	marker_locus	89.79 cM
Apple-C16xC17-F1-2012.10	MdSNPui01833	MdSNPui01833	marker_locus	91.24 cM
Apple-C16xC17-F1-2012.10	CTG1063360	CTG1063360	marker_locus	94.65 cM
Apple-C16xC17-F1-2012.10	Hi02d04	Hi02d04	marker_locus	96.3 cM
Apple-C16xC17-F1-2012.10	CN855119	CN855119	marker_locus	97.84 cM
Apple-C16xC17-F1-2012.10	CTG1061080	CTG1061080	marker_locus	97.84 cM
Apple-C16xC17-F1-2012.10	CN948214	CN948214	marker_locus	100.18 cM
Apple-C16xC17-F1-2012.10	CH05h12	CH05h12	marker_locus	101.65 cM
Apple-C16xC17-F1-2012.10	CN884552	CN884552	marker_locus	102.91 cM
Apple-C16xC17-F1-2012.10	MdSNPui10249	MdSNPui10249	marker_locus	105.3 cM
Apple-C16xC17-F1-2012.10	MdSNPui06659	MdSNPui06659	marker_locus	106.24 cM
Apple-C16xC17-F1-2012.10	GDsnp01731	GDsnp01731	marker_locus	107.6 cM
Apple-C16xC17-F1-2012.10	MdSNPui10248	MdSNPui10248	marker_locus	107.96 cM
Apple-C16xC17-F1-2012.11	CH01c11-1	CH01c11-1	marker_locus	0 cM
Apple-C16xC17-F1-2012.11	CN862645	CN862645	marker_locus	0.65 cM
Apple-C16xC17-F1-2012.11	CH01c11-2	CH01c11-2	marker_locus	1.79 cM
Apple-C16xC17-F1-2012.11	KB01-E11-2	KB01-E11-2	marker_locus	4.27 cM
Apple-C16xC17-F1-2012.11	CTG1064737	CTG1064737	marker_locus	9.35 cM
Apple-C16xC17-F1-2012.11	BACSSR168	BACSSR168	marker_locus	12.58 cM
Apple-C16xC17-F1-2012.11	MdSNPui09325	MdSNPui09325	marker_locus	14.79 cM

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