Apple-C16xC17-F1-2012

Map Overview


Name	Apple-C16xC17-F1-2012
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Coop 16
Paternal parent	Coop 17
Number of loci	1020
Number of linkage groups	17
Publication	[view all]
Contact	Schuyler Korban

Stock

Name

Type

Details

Coop 16_x_Coop 17-F1

population

Contact

Name

Details

Schuyler Korban

First name:	Schuyler
Last name:	Korban
Title:	Researcher
Institution:	University of Illinois
Address:	Urbana, IL 61801, USA
Country:	USA
Email:	korban@illinois.edu

Publication


Year	Publications
2013	Khan MA, Zhao YF, Korban SS. Identification of genetic loci associated with fire blight resistance in Malus through combined use of QTL and association mapping. Physiologia plantarum. 2013 148(3):344-53
2011	Han Y, Zheng D, Vimolmangkang S, Khan MA, Beever JE, Korban SS. Integration of physical and genetic maps in apple confirms whole-genome and segmental duplications in the apple genome. Journal of Experimental Botany. 2011; 62(14):5117-5130.
2012	Khan MA, Han Y, Zhao YF, Troggio M, Korban SS. A multi-population consensus genetic map reveals inconsistent marker order among maps likely attributed to structural variations in the apple genome. PloS one. 2012; 7(11):e47864.

Map Loci

This map contains 1,020 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-C16xC17-F1-2012.11	MdSNPui07427	MdSNPui07427	marker_locus	65.55 cM
Apple-C16xC17-F1-2012.11	MdSNPui07706	MdSNPui07706	marker_locus	65.55 cM
Apple-C16xC17-F1-2012.11	GDsnp01796	GDsnp01796	marker_locus	66.13 cM
Apple-C16xC17-F1-2012.11	MdSNPui00178	MdSNPui00178	marker_locus	66.19 cM
Apple-C16xC17-F1-2012.11	MdSNPui00179	MdSNPui00179	marker_locus	66.19 cM
Apple-C16xC17-F1-2012.11	MdSNPui00180	MdSNPui00180	marker_locus	66.19 cM
Apple-C16xC17-F1-2012.11	CTG1068019	CTG1068019	marker_locus	67.48 cM
Apple-C16xC17-F1-2012.11	CTG1059094	CTG1059094	marker_locus	68.92 cM
Apple-C16xC17-F1-2012.11	MdSNPui05177	MdSNPui05177	marker_locus	71.02 cM
Apple-C16xC17-F1-2012.11	CN881360	CN881360	marker_locus	71.51 cM
Apple-C16xC17-F1-2012.11	CTG1060088	CTG1060088	marker_locus	71.54 cM
Apple-C16xC17-F1-2012.11	CN937679	CN937679	marker_locus	72.65 cM
Apple-C16xC17-F1-2012.11	CO753161	CO753161	marker_locus	72.7 cM
Apple-C16xC17-F1-2012.11	CTG1057901	CTG1057901	marker_locus	80.01 cM
Apple-C16xC17-F1-2012.11	MdSNPui05178	MdSNPui05178	marker_locus	81.69 cM
Apple-C16xC17-F1-2012.11	CH04d08	CH04d08	marker_locus	87.26 cM
Apple-C16xC17-F1-2012.11	CTG1065432	CTG1065432	marker_locus	92.07 cM
Apple-C16xC17-F1-2012.11	CN944465	CN944465	marker_locus	96.34 cM
Apple-C16xC17-F1-2012.11	CTG1057813	CTG1057813	marker_locus	101.96 cM
Apple-C16xC17-F1-2012.11	CN851632	CN851632	marker_locus	102.79 cM
Apple-C16xC17-F1-2012.11	CTG1059942	CTG1059942	marker_locus	102.88 cM
Apple-C16xC17-F1-2012.11	MdSNPui03158	MdSNPui03158	marker_locus	107.8 cM
Apple-C16xC17-F1-2012.11	MdSNPui04707	MdSNPui04707	marker_locus	108.97 cM
Apple-C16xC17-F1-2012.11	MdSNPui04704	MdSNPui04704	marker_locus	108.97 cM
Apple-C16xC17-F1-2012.11	GDsnp00182	GDsnp00182	marker_locus	115.37 cM

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