Pear-PM-F1-PEAR3

Map Overview

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NamePear-PM-F1-PEAR3
SpeciesPyrus x bretschneideri
Pyrus communis
SoftwareJoinMap 4.0
Map typegenetic
Population typeF1
Map unitcM
Maternal parentPEAR3
Paternal parentMoonglow
Population size98
Number of loci204
Number of QTL4
Number of linkage groups17
Publication[view all]
ContactDavid Chagné
Stock
NameTypeDetails
PEAR3_x_Moonglowaccession
Alias:T003xM
Population size:98
Accession type:breeding_research_material
Contact
NameDetails
David Chagné
First name:David
Last name:Chagné
Institution:The Horticulture and Food Research Institute of New Zealand (HortResearch) Palmerston North
Address:PB 11030, Manawatu Mail Centre, Palmerston North 4442, New Zealand
Country:New Zealand
Email:DChagne@hortresearch.co.nz
Map Loci
This map contains 204 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_GA_26508753_Lg11_138333_MAF40_138333_exon1RosBREED_SNP_GA_26508753_Lg11_138333_MAF40_138333_exon1marker_locus10.53 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_CT_19384185_Lg11_01878_MAF20_MDP0000829038_exon1RosBREED_SNP_CT_19384185_Lg11_01878_MAF20_MDP0000829038_exon1marker_locus17.19 cM
Pear-PM-F1-PEAR3.11CH03d02CH03d02marker_locus50.87 cM
Pear-PM-F1-PEAR3.11GDsnp01713GDsnp01713marker_locus54.71 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_TG_5197434_Lg11_00418_MAF40_688881_exon1RosBREED_SNP_TG_5197434_Lg11_00418_MAF40_688881_exon1marker_locus56.44 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_AG_2627039_Lg3_02300_MAF20_MDP0000206447_exon4RosBREED_SNP_AG_2627039_Lg3_02300_MAF20_MDP0000206447_exon4marker_locus58.25 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_CT_2449342_Lg3_RosCOS1398_MAF20_MDP0000188698_exon9RosBREED_SNP_CT_2449342_Lg3_RosCOS1398_MAF20_MDP0000188698_exon9marker_locus58.74 cM
Pear-PM-F1-PEAR3.11Pear_Bartlett_SNP_AG_417_5069947Pear_Bartlett_SNP_AG_417_5069947marker_locus60.12 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_TC_18855907_Lg4_00324_MAF50_1671602_exon1RosBREED_SNP_TC_18855907_Lg4_00324_MAF50_1671602_exon1marker_locus60.12 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_TC_1741931_Lg3_EB140229_MAF40_MDP0000190972_exon3RosBREED_SNP_TC_1741931_Lg3_EB140229_MAF40_MDP0000190972_exon3marker_locus60.56 cM
Pear-PM-F1-PEAR3.11NB111aNB111amarker_locus74.66 cM
Pear-PM-F1-PEAR3.12CH05d04CH05d04marker_locus0 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_TC_1215786_Lg12_RosCOS3293_MAF40_404415_exon1RosBREED_SNP_TC_1215786_Lg12_RosCOS3293_MAF40_404415_exon1marker_locus0.17 cM
Pear-PM-F1-PEAR3.12MdTFL1aMdTFL1amarker_locus6.61 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_TC_13038857_Lg10_RosCOS724_MAF40_MDP0000688434_exon2RosBREED_SNP_TC_13038857_Lg10_RosCOS724_MAF40_MDP0000688434_exon2marker_locus13.99 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_TC_9330075_Lg12_02053_MAF40_MDP0000321559_exon8RosBREED_SNP_TC_9330075_Lg12_02053_MAF40_MDP0000321559_exon8marker_locus21.45 cM
Pear-PM-F1-PEAR3.12KA16KA16marker_locus22.75 cM
Pear-PM-F1-PEAR3.12GDsnp02149GDsnp02149marker_locus23.89 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_GA_12543650_Lg12_MDP0000210506_MAF20_MDP0000210506_exon2RosBREED_SNP_GA_12543650_Lg12_MDP0000210506_MAF20_MDP0000210506_exon2marker_locus23.94 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_GT_20541681_Lg12_00599_MAF10_348860_exon1RosBREED_SNP_GT_20541681_Lg12_00599_MAF10_348860_exon1marker_locus36.64 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_CT_29063582_Lg12_00334_MAF40_1650968_exon1RosBREED_SNP_CT_29063582_Lg12_00334_MAF40_1650968_exon1marker_locus47.79 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_GA_30679125_Lg12_00714_MAF30_1620539_exon3RosBREED_SNP_GA_30679125_Lg12_00714_MAF30_1620539_exon3marker_locus51.09 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_AG_32467148_Lg12_00362_MAF30_MDP0000200335_exon11RosBREED_SNP_AG_32467148_Lg12_00362_MAF30_MDP0000200335_exon11marker_locus53.87 cM
Pear-PM-F1-PEAR3.12RosBREEDSNP_SNP_CA_35420388_Lg12_01793_MAF10_1619944_exon6RosBREED_SNP_CA_35420388_Lg12_01793_MAF10_1619944_exon6marker_locus58.02 cM
Pear-PM-F1-PEAR3.13CH02g01CH02g01marker_locus0 cM
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Map QTL
This map contains 4 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Pear-PM-F1-PEAR3.5qRCP.PM-ch5QTL44 cM46 cM45 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.1QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.2QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.3QTL0 cM30 cM16 cM
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