Pear-PM-F1-PEAR3

Map Overview

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NamePear-PM-F1-PEAR3
SpeciesPyrus x bretschneideri
Pyrus communis
SoftwareJoinMap 4.0
Map typegenetic
Population typeF1
Map unitcM
Maternal parentPEAR3
Paternal parentMoonglow
Population size98
Number of loci204
Number of QTL4
Number of linkage groups17
Publication[view all]
ContactDavid Chagné
Stock
NameTypeDetails
PEAR3_x_Moonglowaccession
Alias:T003xM
Population size:98
Accession type:breeding_research_material
Contact
NameDetails
David Chagné
First name:David
Last name:Chagné
Institution:The Horticulture and Food Research Institute of New Zealand (HortResearch) Palmerston North
Address:PB 11030, Manawatu Mail Centre, Palmerston North 4442, New Zealand
Country:New Zealand
Email:DChagne@hortresearch.co.nz
Map Loci
This map contains 204 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Pear-PM-F1-PEAR3.17RosBREEDSNP_SNP_CT_11711211_Lg5_RosCOS544_MAF20_378820_exon2RosBREED_SNP_CT_11711211_Lg5_RosCOS544_MAF20_378820_exon2marker_locus41.99 cM
Pear-PM-F1-PEAR3.17RosBREEDSNP_SNP_CT_11367113_Lg14_02214_MAF20_MDP0000222294_exon1RosBREED_SNP_CT_11367113_Lg14_02214_MAF20_MDP0000222294_exon1marker_locus43.88 cM
Pear-PM-F1-PEAR3.17RosBREEDSNP_SNP_AC_15169642_Lg6_RosCOS1295_MAF30_470941_exon1RosBREED_SNP_AC_15169642_Lg6_RosCOS1295_MAF30_470941_exon1marker_locus50.32 cM
Pear-PM-F1-PEAR3.17RosBREEDSNP_SNP_CT_25284565_Lg17_MDP0000194307_MAF20_MDP0000194307_exon13RosBREED_SNP_CT_25284565_Lg17_MDP0000194307_MAF20_MDP0000194307_exon13marker_locus61.36 cM
Pear-PM-F1-PEAR3.2CH02f06CH02f06marker_locus0 cM
Pear-PM-F1-PEAR3.2RosBREEDSNP_SNP_AG_4025888_Lg2_01476_MAF10_203524_exon1RosBREED_SNP_AG_4025888_Lg2_01476_MAF10_203524_exon1marker_locus1.61 cM
Pear-PM-F1-PEAR3.2Pear_Bartlett_SNP_AG_950_5071830Pear_Bartlett_SNP_AG_950_5071830marker_locus2.1 cM
Pear-PM-F1-PEAR3.2TsuENH017TsuENH017marker_locus2.97 cM
Pear-PM-F1-PEAR3.2GDsnp00214GDsnp00214marker_locus23.77 cM
Pear-PM-F1-PEAR3.2NH212aNH212amarker_locus29.69 cM
Pear-PM-F1-PEAR3.2Pear_Bartlett_SNP_CT_177_5125939Pear_Bartlett_SNP_CT_177_5125939marker_locus30.79 cM
Pear-PM-F1-PEAR3.2Pear_Bartlett_SNP_GT_409_5089382Pear_Bartlett_SNP_GT_409_5089382marker_locus33.26 cM
Pear-PM-F1-PEAR3.2RosBREEDSNP_SNP_CT_24104888_Lg2_MDP0000136940_MAF50_MDP0000136940_exon1RosBREED_SNP_CT_24104888_Lg2_MDP0000136940_MAF50_MDP0000136940_exon1marker_locus35.71 cM
Pear-PM-F1-PEAR3.2RosBREEDSNP_SNP_AG_27286399_Lg2_02271_MAF50_MDP0000291692_exon7RosBREED_SNP_AG_27286399_Lg2_02271_MAF50_MDP0000291692_exon7marker_locus48.06 cM
Pear-PM-F1-PEAR3.2RosBREEDSNP_SNP_GA_31453820_Lg2_166905_MAF20_166905_exon1RosBREED_SNP_GA_31453820_Lg2_166905_MAF20_166905_exon1marker_locus50.51 cM
Pear-PM-F1-PEAR3.2CH02b10CH02b10marker_locus52.29 cM
Pear-PM-F1-PEAR3.2RosBREEDSNP_SNP_AG_32422411_Lg2_327917_MAF30_327917_exon1RosBREED_SNP_AG_32422411_Lg2_327917_MAF30_327917_exon1marker_locus54.15 cM
Pear-PM-F1-PEAR3.2RosBREEDSNP_SNP_AC_34225113_Lg2_00624_MAF40_1624980_exon2RosBREED_SNP_AC_34225113_Lg2_00624_MAF40_1624980_exon2marker_locus59.21 cM
Pear-PM-F1-PEAR3.2Pear_Bartlett_SNP_GA_218_5066386Pear_Bartlett_SNP_GA_218_5066386marker_locus59.43 cM
Pear-PM-F1-PEAR3.2RosBREEDSNP_SNP_CA_40085225_Lg2_02535_MAF40_MDP0000320988_exon20RosBREED_SNP_CA_40085225_Lg2_02535_MAF40_MDP0000320988_exon20marker_locus66.53 cM
Pear-PM-F1-PEAR3.2RosBREEDSNP_SNP_AG_39497984_Lg2_00167_MAF50_1631668_exon6RosBREED_SNP_AG_39497984_Lg2_00167_MAF50_1631668_exon6marker_locus66.53 cM
Pear-PM-F1-PEAR3.3RosBREEDSNP_SNP_GT_1993476_Lg3_RosCOS1698_MAF10_1627375_exon1RosBREED_SNP_GT_1993476_Lg3_RosCOS1698_MAF10_1627375_exon1marker_locus0 cM
Pear-PM-F1-PEAR3.3GDsnp01167GDsnp01167marker_locus0.93 cM
Pear-PM-F1-PEAR3.3Pear_Bartlett_SNP_CA_221_5062243Pear_Bartlett_SNP_CA_221_5062243marker_locus2.72 cM
Pear-PM-F1-PEAR3.3RosBREEDSNP_SNP_TC_5936130_Lg3_01263_MAF20_1677543_exon1RosBREED_SNP_TC_5936130_Lg3_01263_MAF20_1677543_exon1marker_locus3.34 cM
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Map QTL
This map contains 4 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Pear-PM-F1-PEAR3.5qRCP.PM-ch5QTL44 cM46 cM45 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.1QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.2QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.3QTL0 cM30 cM16 cM
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