Pear-PM-F1-PEAR3

Map Overview

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NamePear-PM-F1-PEAR3
SpeciesPyrus x bretschneideri
Pyrus communis
SoftwareJoinMap 4.0
Map typegenetic
Population typeF1
Map unitcM
Maternal parentPEAR3
Paternal parentMoonglow
Population size98
Number of loci204
Number of QTL4
Number of linkage groups17
Publication[view all]
ContactDavid Chagné
Stock
NameTypeDetails
PEAR3_x_Moonglowaccession
Alias:T003xM
Population size:98
Accession type:breeding_research_material
Contact
NameDetails
David Chagné
First name:David
Last name:Chagné
Institution:The Horticulture and Food Research Institute of New Zealand (HortResearch) Palmerston North
Address:PB 11030, Manawatu Mail Centre, Palmerston North 4442, New Zealand
Country:New Zealand
Email:DChagne@hortresearch.co.nz
Map Loci
This map contains 204 marker loci:
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Linkage GroupMarker NameLocus NameTypePosition
Pear-PM-F1-PEAR3.1NH013aNH013amarker_locus0 cM
Pear-PM-F1-PEAR3.1Pear_Bartlett_SNP_GT_387_4792128Pear_Bartlett_SNP_GT_387_4792128marker_locus24.26 cM
Pear-PM-F1-PEAR3.1Pear_Bartlett_SNP_CT_213_786964Pear_Bartlett_SNP_CT_213_786964marker_locus34.05 cM
Pear-PM-F1-PEAR3.1FFRJ0CP02DJ3YD_234FFRJ0CP02DJ3YD_234marker_locus36.11 cM
Pear-PM-F1-PEAR3.1Pear_Bartlett_SNP_TC_223_5088035Pear_Bartlett_SNP_TC_223_5088035marker_locus42.59 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_AG_861832_Lg10_00106_MAF10_MDP0000277990_exon2RosBREED_SNP_AG_861832_Lg10_00106_MAF10_MDP0000277990_exon2marker_locus0 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_CT_856184_Lg10_00106_MAF30_1643657_exon2RosBREED_SNP_CT_856184_Lg10_00106_MAF30_1643657_exon2marker_locus0.01 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_TG_12055755_Lg10_RosCOS2353_MAF50_1665006_exon5RosBREED_SNP_TG_12055755_Lg10_RosCOS2353_MAF50_1665006_exon5marker_locus12.27 cM
Pear-PM-F1-PEAR3.10Pear_Bartlett_SNP_GA_192_5068090Pear_Bartlett_SNP_GA_192_5068090marker_locus25.9 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_CT_16729529_Lg10_01710_MAF40_703557_exon1RosBREED_SNP_CT_16729529_Lg10_01710_MAF40_703557_exon1marker_locus36.82 cM
Pear-PM-F1-PEAR3.10NH045aNH045amarker_locus41.23 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_GA_20815691_Lg10_PG_MAF20_433322_exon1RosBREED_SNP_GA_20815691_Lg10_PG_MAF20_433322_exon1marker_locus42.01 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_CT_38037125_Lg2_10007_MAF40_485227_exon1RosBREED_SNP_CT_38037125_Lg2_10007_MAF40_485227_exon1marker_locus44.71 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_CT_28131963_Lg10_68102_MAF10_68102_exon1RosBREED_SNP_CT_28131963_Lg10_68102_MAF10_68102_exon1marker_locus55.33 cM
Pear-PM-F1-PEAR3.10Pear_Bartlett_SNP_TC_284_5106235Pear_Bartlett_SNP_TC_284_5106235marker_locus56.81 cM
Pear-PM-F1-PEAR3.10GDsnp00346GDsnp00346marker_locus57.64 cM
Pear-PM-F1-PEAR3.10MS02a01MS02a01marker_locus61.12 cM
Pear-PM-F1-PEAR3.10Pear_Bartlett_SNP_CT_220_5103922Pear_Bartlett_SNP_CT_220_5103922marker_locus61.3 cM
Pear-PM-F1-PEAR3.10Pear_Bartlett_SNP_GA_193_5146399Pear_Bartlett_SNP_GA_193_5146399marker_locus61.31 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_AG_32730568_Lg10_RosCOS3231_MAF50_492103_exon1RosBREED_SNP_AG_32730568_Lg10_RosCOS3231_MAF50_492103_exon1marker_locus62.64 cM
Pear-PM-F1-PEAR3.10RosBREEDSNP_SNP_AC_784801_Lg5_00460_MAF20_1670871_exon1RosBREED_SNP_AC_784801_Lg5_00460_MAF20_1670871_exon1marker_locus64.42 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_TC_7741659_Lg12_01703_MAF20_MDP0000736860_exon1RosBREED_SNP_TC_7741659_Lg12_01703_MAF20_MDP0000736860_exon1marker_locus0 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_GT_29809045_Lg11_00662_MAF20_1633056_exon3RosBREED_SNP_GT_29809045_Lg11_00662_MAF20_1633056_exon3marker_locus8.92 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_GT_13708618_Lg10_snpEG631376_MAF30_MDP0000139189_exon4RosBREED_SNP_GT_13708618_Lg10_snpEG631376_MAF30_MDP0000139189_exon4marker_locus10.15 cM
Pear-PM-F1-PEAR3.11RosBREEDSNP_SNP_CT_26810795_Lg11_01361_MAF20_MDP0000180811_exon3RosBREED_SNP_CT_26810795_Lg11_01361_MAF20_MDP0000180811_exon3marker_locus10.53 cM
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Map QTL
This map contains 4 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Pear-PM-F1-PEAR3.5qRCP.PM-ch5QTL44 cM46 cM45 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.1QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.2QTL0 cM30 cM16 cM
Pear-PM-F1-PEAR3.8qRCP.PM-ch8.3QTL0 cM30 cM16 cM
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