Pear-PM-F1-Moonglow

Map Overview

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NamePear-PM-F1-Moonglow
SpeciesPyrus communis
SoftwareJoinMap 4.0
Map typegenetic
Population typeF1
Map unitcM
Maternal parentPEAR3
Paternal parentMoonglow
Population size98
Number of loci460
Number of QTL1
Number of linkage groups17
Publication[view all]
ContactDavid Chagné
Stock
NameTypeDetails
PEAR3_x_Moonglowbreeding_research_material
Alias:T003xM
Population size:98
Map Loci
This map contains 460 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Pear-PM-F1-Moonglow.1NH013aNH013amarker_locus0 cM
Pear-PM-F1-Moonglow.1RosBREEDSNP_SNP_TC_9418092_Lg10_00875_MAF20_1667779_exon1RosBREED_SNP_TC_9418092_Lg10_00875_MAF20_1667779_exon1marker_locus0.57 cM
Pear-PM-F1-Moonglow.1RosBREEDSNP_SNP_CT_5940163_Lg1_00152_MAF50_1642197_exon1RosBREED_SNP_CT_5940163_Lg1_00152_MAF50_1642197_exon1marker_locus0.59 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_AG_516_5140453Pear_Bartlett_SNP_AG_516_5140453marker_locus7.19 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_CT_443_5143533Pear_Bartlett_SNP_CT_443_5143533marker_locus7.2 cM
Pear-PM-F1-Moonglow.1RosBREEDSNP_SNP_GT_29441767_Lg14_01811_MAF20_107955_exon1RosBREED_SNP_GT_29441767_Lg14_01811_MAF20_107955_exon1marker_locus10.68 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_GT_296_5080390Pear_Bartlett_SNP_GT_296_5080390marker_locus20.1 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_CA_221_5057410Pear_Bartlett_SNP_CA_221_5057410marker_locus24.65 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_GT_516_5093860Pear_Bartlett_SNP_GT_516_5093860marker_locus24.94 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_AG_376_5107163Pear_Bartlett_SNP_AG_376_5107163marker_locus27.75 cM
Pear-PM-F1-Moonglow.1FFRJ0CP02DZVMG_150FFRJ0CP02DZVMG_150marker_locus29.64 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_CT_213_786964Pear_Bartlett_SNP_CT_213_786964marker_locus33.96 cM
Pear-PM-F1-Moonglow.1Md-Exp7Md-Exp7marker_locus40.45 cM
Pear-PM-F1-Moonglow.1RosBREEDSNP_SNP_AG_27536555_Lg14_00052_MAF40_1639446_exon1RosBREED_SNP_AG_27536555_Lg14_00052_MAF40_1639446_exon1marker_locus44.15 cM
Pear-PM-F1-Moonglow.1RosBREEDSNP_SNP_GA_27534464_Lg14_00052_MAF30_1639446_exon2RosBREED_SNP_GA_27534464_Lg14_00052_MAF30_1639446_exon2marker_locus44.16 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_TC_393_4890848Pear_Bartlett_SNP_TC_393_4890848marker_locus49.94 cM
Pear-PM-F1-Moonglow.1CHVf1CHVf1marker_locus51.53 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_CT_178_5105254Pear_Bartlett_SNP_CT_178_5105254marker_locus54.67 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_CT_165_5054950Pear_Bartlett_SNP_CT_165_5054950marker_locus54.67 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_AC_395_5079577Pear_Bartlett_SNP_AC_395_5079577marker_locus55.25 cM
Pear-PM-F1-Moonglow.1Pear_Bartlett_SNP_GT_287_5072009Pear_Bartlett_SNP_GT_287_5072009marker_locus57.46 cM
Pear-PM-F1-Moonglow.1RosBREEDSNP_SNP_AG_35438925_Lg1_02092_MAF10_493004_exon1RosBREED_SNP_AG_35438925_Lg1_02092_MAF10_493004_exon1marker_locus60.63 cM
Pear-PM-F1-Moonglow.1RosBREEDSNP_SNP_GT_29342518_Lg3_02463_MAF50_MDP0000798662_exon2RosBREED_SNP_GT_29342518_Lg3_02463_MAF50_MDP0000798662_exon2marker_locus60.65 cM
Pear-PM-F1-Moonglow.10Pear_Bartlett_SNP_TC_1079_5139614Pear_Bartlett_SNP_TC_1079_5139614marker_locus0 cM
Pear-PM-F1-Moonglow.10RosBREEDSNP_SNP_TC_23899418_Lg1_RosCOS1602_MAF20_MDP0000283296_exon1RosBREED_SNP_TC_23899418_Lg1_RosCOS1602_MAF20_MDP0000283296_exon1marker_locus0 cM
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Contact
NameDetails
David Chagné
First name:David
Last name:Chagné
Institution:The Horticulture and Food Research Institute of New Zealand (HortResearch) Palmerston North
Address:PB 11030, Manawatu Mail Centre, Palmerston North 4442, New Zealand
Country:New Zealand
Email:DChagne@hortresearch.co.nz
Map QTL
This map contains 1 QTL:
Download Table
Linkage GroupNameTypeStartStopPeak
Pear-PM-F1-Moonglow.15qRCP.PM-ch15QTL49 cM51 cM49.5 cM
Page
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Publication
YearPublications
2013Montanari S, Saeed M, Knäbel M, Kim Y, Troggio M, Malnoy M, Velasco R, Fontana P, Won K, Durel CE, Perchepied L, Schaffer R, Wiedow C, Bus V, Brewer L, Gardiner SE, Crowhurst RN, Chagné D. Identification of Pyrus Single Nucleotide Polymorphisms (SNPs) and Evaluation for Genetic Mapping in European Pear and Interspecific Pyrus Hybrids. PloS one. 2013; 8(10):e77022.
2015Montanari S, Guérif P, Ravon E, Denancé C, Muranty H, Velasco R, Chagné D, Bus BGM, Robert P, Perchepied L, Durel CE.. Genetic mapping of Cacopsylla pyri resistance in an interspecific pear (Pyrus spp.) population. Tree Genetics and Genomes. 2015; 11:74.
Cross References
External references for this map
DatabaseAccession
GDR CMap114
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