Apple-OA-F1-Orin | GDR

Map Overview


Name	Apple-OA-F1-Orin
Species	Malus x domestica
Analysis method	double pseudo-testcross mapping
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Orin
Paternal parent	Akane
Number of loci	251
Number of QTL	16
Number of linkage groups	17
Publication	[view all]
Contact	Miyuki Kunihisa

Stock

Name

Type

Details

Orin_x_Akane-F1

population

Contact

Name

Details

Miyuki Kunihisa

First name:	Miyuki
Last name:	Kunihisa
Institution:	NARO Institute of Fruit Tree Science
Address:	2-1 Fujimoto, Tsukuba, Ibaraki 305-8605
Country:	Japan
Email:	miyuky@affrc.go.jp
Phone:	81-29-838-6437
Keywords:	fruit drop

Publication


Year	Publications
2014	Kunihisa M, Moriya S, Abe K, Okada K, Haji T, Hayashi T, Kim H, Nishitani C, Terakami S, Yamamoto T. Identification of QTLs for fruit quality traits in Japanese apples: QTLs for early ripening are tightly related to preharvest fruit drop. Breeding science. 2014 Sep; 64(3):240-51.

Map Loci

This map contains 251 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-OA-F1-Orin.OR16	CH05c06	CH05c06	marker_locus	6.6 cM
Apple-OA-F1-Orin.OR16	TsuENH182-2	TsuENH182-2	marker_locus	30.1 cM
Apple-OA-F1-Orin.OR16	Hi08f12	Hi08f12	marker_locus	35.9 cM
Apple-OA-F1-Orin.OR16	CH05a04	CH05a04	marker_locus	40.4 cM
Apple-OA-F1-Orin.OR16	NB133a-1	NB133a-1	marker_locus	57.3 cM
Apple-OA-F1-Orin.OR16	TsuENH042-1	TsuENH042-1	marker_locus	57.3 cM
Apple-OA-F1-Orin.OR16	TsuENH214	TsuENH214	marker_locus	64.7 cM
Apple-OA-F1-Orin.OR16	TsuGNH234	TsuGNH234	marker_locus	68.4 cM
Apple-OA-F1-Orin.OR16	Mdo.chr1.15	Mdo.chr1.15	marker_locus	69.2 cM
Apple-OA-F1-Orin.OR17	CH04c06-2	CH04c06-2	marker_locus	0 cM
Apple-OA-F1-Orin.OR17	TsuGNH061	TsuGNH061	marker_locus	4.5 cM
Apple-OA-F1-Orin.OR17	NH015a	NH015a	marker_locus	5.2 cM
Apple-OA-F1-Orin.OR17	AT000174SSR	AT000174SSR	marker_locus	7.5 cM
Apple-OA-F1-Orin.OR17	NZmsEE663955	NZmsEE663955	marker_locus	7.5 cM
Apple-OA-F1-Orin.OR17	NB125a	NB125a	marker_locus	15.6 cM
Apple-OA-F1-Orin.OR17	NZmsMDAJ1681	NZmsMDAJ1681	marker_locus	15.6 cM
Apple-OA-F1-Orin.OR17	TsuENH033	TsuENH033	marker_locus	15.6 cM
Apple-OA-F1-Orin.OR17	AJ001681SSR	AJ001681SSR	marker_locus	15.6 cM
Apple-OA-F1-Orin.OR17	CH05g03	CH05g03	marker_locus	16.3 cM
Apple-OA-F1-Orin.OR17	Hi03c05	Hi03c05	marker_locus	27.1 cM
Apple-OA-F1-Orin.OR17	MEST119	MEST119	marker_locus	33.7 cM
Apple-OA-F1-Orin.OR17	TsuGNH008	TsuGNH008	marker_locus	35.3 cM
Apple-OA-F1-Orin.OR17	Hi02f12	Hi02f12	marker_locus	52 cM
Apple-OA-F1-Orin.OR17	MEST164	MEST164	marker_locus	55.1 cM
Apple-OA-F1-Orin.OR17	CH01h02-2	CH01h02-2	marker_locus	57.2 cM

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Map QTL

This map contains 16 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
Apple-OA-F1-Orin.OR15	qHD.OA-ch15-Orin	QTL	-	-	66.2 cM
Apple-OA-F1-Orin.OR16	qHD.OA-ch16-Orin	QTL	-	-	27.6 cM
Apple-OA-F1-Orin.OR2	qRC.OA-ch2-Orin	QTL	-	-	1 cM
Apple-OA-F1-Orin.OR4	qRP.OA-ch4-Orin	QTL	-	-	53.9 cM
Apple-OA-F1-Orin.OR8	qRP.OA-ch8-Orin	QTL	-	-	37.6 cM
Apple-OA-F1-Orin.OR15	qFRJUC.OA-ch15-Orin	QTL	-	-	39.2 cM
Apple-OA-F1-Orin.OR16	qFRJUC.OA-ch16-Orin	QTL	-	-	14.1 cM
Apple-OA-F1-Orin.OR10	qFRFRM.OA-ch10-Orin	QTL	-	-	47 cM
Apple-OA-F1-Orin.OR11	qFRFRM.OA-ch11-Orin	QTL	-	-	6.3 cM
Apple-OA-F1-Orin.OR15	qPFD.OA-ch15-Orin	QTL	-	-	62.5 cM
Apple-OA-F1-Orin.OR16	qTITA.OA-ch16-Orin	QTL	-	-	8.6 cM
Apple-OA-F1-Orin.OR15	qSSC.OA-ch15-Orin	QTL	-	-	62.5 cM
Apple-OA-F1-Orin.OR16	qSSC.OA-ch16-Orin	QTL	-	-	16.6 cM
Apple-OA-F1-Orin.OR12	qSOR.OA-ch12-Orin	QTL	-	-	23.6 cM
Apple-OA-F1-Orin.OR10	qJB.OA-ch10-Orin	QTL	-	-	54.6 cM
Apple-OA-F1-Orin.OR8	qFD.OA-ch8-Orin	QTL	-	-	38.3 cM

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