Apple-OA-F1-Orin | GDR

Map Overview


Name	Apple-OA-F1-Orin
Species	Malus x domestica
Analysis method	double pseudo-testcross mapping
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Orin
Paternal parent	Akane
Number of loci	251
Number of QTL	16
Number of linkage groups	17
Publication	[view all]
Contact	Miyuki Kunihisa

Stock

Name

Type

Details

Orin_x_Akane-F1

population

Contact

Name

Details

Miyuki Kunihisa

First name:	Miyuki
Last name:	Kunihisa
Institution:	NARO Institute of Fruit Tree Science
Address:	2-1 Fujimoto, Tsukuba, Ibaraki 305-8605
Country:	Japan
Email:	miyuky@affrc.go.jp
Phone:	81-29-838-6437
Keywords:	fruit drop

Publication


Year	Publications
2014	Kunihisa M, Moriya S, Abe K, Okada K, Haji T, Hayashi T, Kim H, Nishitani C, Terakami S, Yamamoto T. Identification of QTLs for fruit quality traits in Japanese apples: QTLs for early ripening are tightly related to preharvest fruit drop. Breeding science. 2014 Sep; 64(3):240-51.

Map Loci

This map contains 251 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-OA-F1-Orin.OR17	S-RNase	S-Rnase	marker_locus	62.5 cM
Apple-OA-F1-Orin.OR17	Hi07h02	Hi07h02	marker_locus	70.8 cM
Apple-OA-F1-Orin.OR17	NZmsEB137525	NZmsEB137525	marker_locus	70.8 cM
Apple-OA-F1-Orin.OR2	CN581493SSR	CN581493SSR	marker_locus	0 cM
Apple-OA-F1-Orin.OR2	Hi22d06	Hi22d06	marker_locus	0 cM
Apple-OA-F1-Orin.OR2	MEST155	MEST155	marker_locus	7.9 cM
Apple-OA-F1-Orin.OR2	MEST198	MEST198	marker_locus	28.6 cM
Apple-OA-F1-Orin.OR2	NH033b	NH033b	marker_locus	30.9 cM
Apple-OA-F1-Orin.OR2	Hi24f04	Hi24f04	marker_locus	41.7 cM
Apple-OA-F1-Orin.OR2	CH02c06	Ch02c06	marker_locus	46.2 cM
Apple-OA-F1-Orin.OR2	CH02b10	CH02b10	marker_locus	48.4 cM
Apple-OA-F1-Orin.OR2	CH05e03	Ch05e03	marker_locus	50.6 cM
Apple-OA-F1-Orin.OR2	NZmsEB107305-ml-1	NZmsEB107305-ml-1	marker_locus	70.6 cM
Apple-OA-F1-Orin.OR3	SAmsEE663746	SAmsEE663746	marker_locus	0 cM
Apple-OA-F1-Orin.OR3	MEST134	MEST134	marker_locus	3.7 cM
Apple-OA-F1-Orin.OR3	Hi03d06	Hi03d06	marker_locus	14.4 cM
Apple-OA-F1-Orin.OR3	TsuENH023	TsuENH023	marker_locus	33.1 cM
Apple-OA-F1-Orin.OR3	SAmsAU301301	SAmsAU301301	marker_locus	39.9 cM
Apple-OA-F1-Orin.OR3	TsuGNH188_m	TsuGNH188_m	marker_locus	41.4 cM
Apple-OA-F1-Orin.OR3	NB109a	NB109a	marker_locus	66 cM
Apple-OA-F1-Orin.OR3	NH030a-2	NH030a-2	marker_locus	68.2 cM
Apple-OA-F1-Orin.OR3	MS14h03	MS14h03	marker_locus	72.6 cM
Apple-OA-F1-Orin.OR4	Hi01e10	Hi01e10	marker_locus	0 cM
Apple-OA-F1-Orin.OR4	SAmsEB132187	SAmsEB132187	marker_locus	2.2 cM
Apple-OA-F1-Orin.OR4	TsuGNH125	TsuGNH125	marker_locus	5.9 cM

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Map QTL

This map contains 16 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
Apple-OA-F1-Orin.OR15	qHD.OA-ch15-Orin	QTL	-	-	66.2 cM
Apple-OA-F1-Orin.OR16	qHD.OA-ch16-Orin	QTL	-	-	27.6 cM
Apple-OA-F1-Orin.OR2	qRC.OA-ch2-Orin	QTL	-	-	1 cM
Apple-OA-F1-Orin.OR4	qRP.OA-ch4-Orin	QTL	-	-	53.9 cM
Apple-OA-F1-Orin.OR8	qRP.OA-ch8-Orin	QTL	-	-	37.6 cM
Apple-OA-F1-Orin.OR15	qFRJUC.OA-ch15-Orin	QTL	-	-	39.2 cM
Apple-OA-F1-Orin.OR16	qFRJUC.OA-ch16-Orin	QTL	-	-	14.1 cM
Apple-OA-F1-Orin.OR10	qFRFRM.OA-ch10-Orin	QTL	-	-	47 cM
Apple-OA-F1-Orin.OR11	qFRFRM.OA-ch11-Orin	QTL	-	-	6.3 cM
Apple-OA-F1-Orin.OR15	qPFD.OA-ch15-Orin	QTL	-	-	62.5 cM
Apple-OA-F1-Orin.OR16	qTITA.OA-ch16-Orin	QTL	-	-	8.6 cM
Apple-OA-F1-Orin.OR15	qSSC.OA-ch15-Orin	QTL	-	-	62.5 cM
Apple-OA-F1-Orin.OR16	qSSC.OA-ch16-Orin	QTL	-	-	16.6 cM
Apple-OA-F1-Orin.OR12	qSOR.OA-ch12-Orin	QTL	-	-	23.6 cM
Apple-OA-F1-Orin.OR10	qJB.OA-ch10-Orin	QTL	-	-	54.6 cM
Apple-OA-F1-Orin.OR8	qFD.OA-ch8-Orin	QTL	-	-	38.3 cM

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