Apple-OA-F1-Orin | GDR

Map Overview


Name	Apple-OA-F1-Orin
Species	Malus x domestica
Analysis method	double pseudo-testcross mapping
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Orin
Paternal parent	Akane
Number of loci	251
Number of QTL	16
Number of linkage groups	17
Publication	[view all]
Contact	Miyuki Kunihisa

Stock

Name

Type

Details

Orin_x_Akane-F1

population

Contact

Name

Details

Miyuki Kunihisa

First name:	Miyuki
Last name:	Kunihisa
Institution:	NARO Institute of Fruit Tree Science
Address:	2-1 Fujimoto, Tsukuba, Ibaraki 305-8605
Country:	Japan
Email:	miyuky@affrc.go.jp
Phone:	81-29-838-6437
Keywords:	fruit drop

Publication


Year	Publications
2014	Kunihisa M, Moriya S, Abe K, Okada K, Haji T, Hayashi T, Kim H, Nishitani C, Terakami S, Yamamoto T. Identification of QTLs for fruit quality traits in Japanese apples: QTLs for early ripening are tightly related to preharvest fruit drop. Breeding science. 2014 Sep; 64(3):240-51.

Map Loci

This map contains 251 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Apple-OA-F1-Orin.OR4	TsuGNH121	TsuGNH121	marker_locus	5.9 cM
Apple-OA-F1-Orin.OR4	NH011b	NH011b	marker_locus	8.1 cM
Apple-OA-F1-Orin.OR4	SAmsEB153928	SAmsEB153928	marker_locus	10.4 cM
Apple-OA-F1-Orin.OR4	SAmsCN579721	SAmsCN579721	marker_locus	12.6 cM
Apple-OA-F1-Orin.OR4	SAmsCV128959	SAmsCV128959	marker_locus	14.1 cM
Apple-OA-F1-Orin.OR4	CH02h11a	CH02h11a	marker_locus	19.4 cM
Apple-OA-F1-Orin.OR4	TsuENH004	TsuENH004	marker_locus	39.2 cM
Apple-OA-F1-Orin.OR4	MEST138-1	MEST138-1	marker_locus	40.8 cM
Apple-OA-F1-Orin.OR4	NB141b	NB141b	marker_locus	51.9 cM
Apple-OA-F1-Orin.OR4	TsuGNH078	TsuGNH078	marker_locus	61.8 cM
Apple-OA-F1-Orin.OR4	NB131a	NB131a	marker_locus	61.8 cM
Apple-OA-F1-Orin.OR4	CH02c02b	CH02c02b	marker_locus	62.5 cM
Apple-OA-F1-Orin.OR4	AT000420SSR	AT000420SSR	marker_locus	66.2 cM
Apple-OA-F1-Orin.OR4	Hi08e04	Hi08e04	marker_locus	66.2 cM
Apple-OA-F1-Orin.OR4	TsuGNH135	TsuGNH135	marker_locus	67 cM
Apple-OA-F1-Orin.OR4	TsuGNH076	TsuGNH076	marker_locus	67 cM
Apple-OA-F1-Orin.OR5	CH03a09	CH03a09	marker_locus	0 cM
Apple-OA-F1-Orin.OR5	CH05e06	CH05e06	marker_locus	6.1 cM
Apple-OA-F1-Orin.OR5	TsuENH235	TsuENH235	marker_locus	14.3 cM
Apple-OA-F1-Orin.OR5	NZmsEB132749	NZmsEB132749	marker_locus	17.3 cM
Apple-OA-F1-Orin.OR5	NZmsEB134379	NZmsEB134379	marker_locus	17.3 cM
Apple-OA-F1-Orin.OR5	SAmsCN887525	SAmsCN887525	marker_locus	17.3 cM
Apple-OA-F1-Orin.OR5	SAmsCN544835	SAmsCN544835	marker_locus	21.8 cM
Apple-OA-F1-Orin.OR5	CH04e03	CH04e03	marker_locus	61.9 cM
Apple-OA-F1-Orin.OR5	CN496002SSR	CN496002SSR	marker_locus	64.8 cM

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Map QTL

This map contains 16 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
Apple-OA-F1-Orin.OR15	qHD.OA-ch15-Orin	QTL	-	-	66.2 cM
Apple-OA-F1-Orin.OR16	qHD.OA-ch16-Orin	QTL	-	-	27.6 cM
Apple-OA-F1-Orin.OR2	qRC.OA-ch2-Orin	QTL	-	-	1 cM
Apple-OA-F1-Orin.OR4	qRP.OA-ch4-Orin	QTL	-	-	53.9 cM
Apple-OA-F1-Orin.OR8	qRP.OA-ch8-Orin	QTL	-	-	37.6 cM
Apple-OA-F1-Orin.OR15	qFRJUC.OA-ch15-Orin	QTL	-	-	39.2 cM
Apple-OA-F1-Orin.OR16	qFRJUC.OA-ch16-Orin	QTL	-	-	14.1 cM
Apple-OA-F1-Orin.OR10	qFRFRM.OA-ch10-Orin	QTL	-	-	47 cM
Apple-OA-F1-Orin.OR11	qFRFRM.OA-ch11-Orin	QTL	-	-	6.3 cM
Apple-OA-F1-Orin.OR15	qPFD.OA-ch15-Orin	QTL	-	-	62.5 cM
Apple-OA-F1-Orin.OR16	qTITA.OA-ch16-Orin	QTL	-	-	8.6 cM
Apple-OA-F1-Orin.OR15	qSSC.OA-ch15-Orin	QTL	-	-	62.5 cM
Apple-OA-F1-Orin.OR16	qSSC.OA-ch16-Orin	QTL	-	-	16.6 cM
Apple-OA-F1-Orin.OR12	qSOR.OA-ch12-Orin	QTL	-	-	23.6 cM
Apple-OA-F1-Orin.OR10	qJB.OA-ch10-Orin	QTL	-	-	54.6 cM
Apple-OA-F1-Orin.OR8	qFD.OA-ch8-Orin	QTL	-	-	38.3 cM

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