Apple-OA-F1-Akane

Map Overview


Name	Apple-OA-F1-Akane
Species	Malus x domestica
Analysis method	double pseudo-testcross mapping
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Orin
Paternal parent	Akane
Number of loci	290
Number of QTL	22
Number of linkage groups	18
Publication	[view all]
Contact	Miyuki Kunihisa

Stock

Name

Type

Details

population

Contact

Name

Details

Miyuki Kunihisa

First name:	Miyuki
Last name:	Kunihisa
Institution:	NARO Institute of Fruit Tree Science
Address:	2-1 Fujimoto, Tsukuba, Ibaraki 305-8605
Country:	Japan
Email:	miyuky@affrc.go.jp
Phone:	81-29-838-6437
Keywords:	fruit drop

Publication


Year	Publications
2014	Kunihisa M, Moriya S, Abe K, Okada K, Haji T, Hayashi T, Kim H, Nishitani C, Terakami S, Yamamoto T. Identification of QTLs for fruit quality traits in Japanese apples: QTLs for early ripening are tightly related to preharvest fruit drop. Breeding science. 2014 Sep; 64(3):240-51.

Map Loci

This map contains 290 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
Apple-OA-F1-Akane.AK14	TsuENH234	TsuENH234	marker_locus	3.7 cM
Apple-OA-F1-Akane.AK14	CH01g05	CH01g05	marker_locus	3.7 cM
Apple-OA-F1-Akane.AK14	CH04f06	CH04f06	marker_locus	3.7 cM
Apple-OA-F1-Akane.AK14	CH03d08	CH03d08	marker_locus	3.7 cM
Apple-OA-F1-Akane.AK14	Hi05g12	Hi05g12	marker_locus	4.4 cM
Apple-OA-F1-Akane.AK14	CH01e01	CH01e01	marker_locus	4.4 cM
Apple-OA-F1-Akane.AK14	MS01a05	MS01a05	marker_locus	7.4 cM
Apple-OA-F1-Akane.AK14	CH05g11	CH05g11	marker_locus	9.6 cM
Apple-OA-F1-Akane.AK14	Hi02d11	Hi02d11	marker_locus	9.6 cM
Apple-OA-F1-Akane.AK14	CH03g04	CH03g04	marker_locus	9.6 cM
Apple-OA-F1-Akane.AK14	CH04c07	CH04c07	marker_locus	9.6 cM
Apple-OA-F1-Akane.AK14	CH03a02	CH03a02	marker_locus	14.8 cM
Apple-OA-F1-Akane.AK14	CH05d03	CH05d03	marker_locus	16.3 cM
Apple-OA-F1-Akane.AK14	TsuENH031	TsuENH031	marker_locus	17.1 cM
Apple-OA-F1-Akane.AK14	U78948SSR	U78948SSR	marker_locus	33 cM
Apple-OA-F1-Akane.AK14	MDAJ761SSR	MDAJ761SSR	marker_locus	33 cM
Apple-OA-F1-Akane.AK15	MEST178	MEST178	marker_locus	0 cM
Apple-OA-F1-Akane.AK15	TsuENH125	TsuENH125	marker_locus	0.8 cM
Apple-OA-F1-Akane.AK15	TsuGNH132	TsuGNH132	marker_locus	7.4 cM
Apple-OA-F1-Akane.AK15	CH03b06	CH03b06	marker_locus	17.5 cM
Apple-OA-F1-Akane.AK15	Hi03g06	Hi03g06	marker_locus	24.7 cM
Apple-OA-F1-Akane.AK15	Hi06f09	Hi06f09	marker_locus	36 cM
Apple-OA-F1-Akane.AK15	MEST150	MEST150	marker_locus	37.5 cM
Apple-OA-F1-Akane.AK15	CH01d08	CH01d08	marker_locus	40.5 cM
Apple-OA-F1-Akane.AK15	Hi02d02	Hi02d02	marker_locus	42.7 cM

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Map QTL

This map contains 22 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
Apple-OA-F1-Akane.AK3	qHD.OA-ch3-Akane	QTL	-	-	66.5 cM
Apple-OA-F1-Akane.AK10	qHD.OA-ch10-Akane	QTL	-	-	30.9 cM
Apple-OA-F1-Akane.AK2	qRC.OA-ch2-Akane	QTL	-	-	50.9 cM
Apple-OA-F1-Akane.AK6	qRP.OA-ch6-Akane	QTL	-	-	36.3 cM
Apple-OA-F1-Akane.AK15	qRP.OA-ch15-Akane	QTL	-	-	87 cM
Apple-OA-F1-Akane.AK9	qFSC.OA-ch9-Akane	QTL	-	-	69.4 cM
Apple-OA-F1-Akane.AK16	qFSC.OA-ch16-Akane	QTL	-	-	15.5 cM
Apple-OA-F1-Akane.AK3	qFRFRM.OA-ch3-Akane	QTL	-	-	74.2 cM
Apple-OA-F1-Akane.AK5	qPFD.OA-ch5-Akane	QTL	-	-	16.1 cM
Apple-OA-F1-Akane.AK8	qTITA.OA-ch8-Akane	QTL	-	-	26.8 cM
Apple-OA-F1-Akane.AK15	qTITA.OA-ch15-Akane	QTL	-	-	42.7 cM
Apple-OA-F1-Akane.AK16	qTITA.OA-ch16-Akane	QTL	-	-	6.2 cM
Apple-OA-F1-Akane.AK16	qSSC.OA-ch16-Akane	QTL	-	-	22 cM
Apple-OA-F1-Akane.AK10	qSUC.OA-ch10-Akane	QTL	-	-	26.3 cM
Apple-OA-F1-Akane.AK15	qSUC.OA-ch15-Akane	QTL	-	-	92.5 cM
Apple-OA-F1-Akane.AK5	qGLC.OA-ch5-Akane	QTL	-	-	0 cM
Apple-OA-F1-Akane.AK6	qFRU.OA-ch6-Akane	QTL	-	-	8.6 cM
Apple-OA-F1-Akane.AK16	qFRU.OA-ch16-Akane	QTL	-	-	18.5 cM
Apple-OA-F1-Akane.AK16	qSOR.OA-ch16-Akane	QTL	-	-	15.5 cM
Apple-OA-F1-Akane.AK10	qJB.OA-ch10-Akane	QTL	-	-	19.3 cM
Apple-OA-F1-Akane.AK16	qJB.OA-ch16-Akane	QTL	-	-	9.3 cM
Apple-OA-F1-Akane.AK15	qFD.OA-ch15-Akane	QTL	-	-	86.3 cM

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