Apple-OA-F1-Akane

Map Overview


Name	Apple-OA-F1-Akane
Species	Malus x domestica
Analysis method	double pseudo-testcross mapping
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	Orin
Paternal parent	Akane
Number of loci	290
Number of QTL	22
Number of linkage groups	18
Publication	[view all]
Contact	Miyuki Kunihisa

Stock

Name

Type

Details

population

Contact

Name

Details

Miyuki Kunihisa

First name:	Miyuki
Last name:	Kunihisa
Institution:	NARO Institute of Fruit Tree Science
Address:	2-1 Fujimoto, Tsukuba, Ibaraki 305-8605
Country:	Japan
Email:	miyuky@affrc.go.jp
Phone:	81-29-838-6437
Keywords:	fruit drop

Publication


Year	Publications
2014	Kunihisa M, Moriya S, Abe K, Okada K, Haji T, Hayashi T, Kim H, Nishitani C, Terakami S, Yamamoto T. Identification of QTLs for fruit quality traits in Japanese apples: QTLs for early ripening are tightly related to preharvest fruit drop. Breeding science. 2014 Sep; 64(3):240-51.

Map Loci

This map contains 290 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-OA-F1-Akane.AK4	SAmsEB153928	SAmsEB153928	marker_locus	10.2 cM
Apple-OA-F1-Akane.AK4	SAmsCN579721	SAmsCN579721	marker_locus	12.5 cM
Apple-OA-F1-Akane.AK4	SAmsCV128959	SAmsCV128959	marker_locus	13.2 cM
Apple-OA-F1-Akane.AK4	CH02h11a	CH02h11a	marker_locus	14.7 cM
Apple-OA-F1-Akane.AK4	TsuENH131	TsuENH131	marker_locus	20.7 cM
Apple-OA-F1-Akane.AK4	NB127b	NB127b	marker_locus	20.7 cM
Apple-OA-F1-Akane.AK4	MEST138-1	MEST138-1	marker_locus	30.9 cM
Apple-OA-F1-Akane.AK4	NB141b	NB141b	marker_locus	37.4 cM
Apple-OA-F1-Akane.AK4	CH02c02b	CH02c02b	marker_locus	55.2 cM
Apple-OA-F1-Akane.AK4	AT000420SSR	AT000420SSR	marker_locus	55.8 cM
Apple-OA-F1-Akane.AK4	BCA141	BCA141	marker_locus	56.6 cM
Apple-OA-F1-Akane.AK4	TsuGNH090	TsuGNH090	marker_locus	56.6 cM
Apple-OA-F1-Akane.AK4	Hi08e04	Hi08e04	marker_locus	56.6 cM
Apple-OA-F1-Akane.AK5	Hi09b04	Hi09b04	marker_locus	0 cM
Apple-OA-F1-Akane.AK5	Hi04a08	Hi04a08	marker_locus	2.3 cM
Apple-OA-F1-Akane.AK5	NB115b	NB115b	marker_locus	4.6 cM
Apple-OA-F1-Akane.AK5	CH03a09	CH03a09	marker_locus	11.7 cM
Apple-OA-F1-Akane.AK5	CH05e06	CH05e06	marker_locus	20.1 cM
Apple-OA-F1-Akane.AK5	EMPc106	EMPc106	marker_locus	27.3 cM
Apple-OA-F1-Akane.AK5	TsuENH235	TsuENH235	marker_locus	28.6 cM
Apple-OA-F1-Akane.AK5	NZmsEB132749	NZmsEB132749	marker_locus	30.8 cM
Apple-OA-F1-Akane.AK5	SAmsCN922831	SAmsCN922831	marker_locus	30.8 cM
Apple-OA-F1-Akane.AK5	NZmsEB134379	NZmsEB134379	marker_locus	30.8 cM
Apple-OA-F1-Akane.AK5	SAmsCN544835	SAmsCN544835	marker_locus	35.2 cM
Apple-OA-F1-Akane.AK5	MEST105	MEST105	marker_locus	36.8 cM

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Map QTL

This map contains 22 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
Apple-OA-F1-Akane.AK3	qHD.OA-ch3-Akane	QTL	-	-	66.5 cM
Apple-OA-F1-Akane.AK10	qHD.OA-ch10-Akane	QTL	-	-	30.9 cM
Apple-OA-F1-Akane.AK2	qRC.OA-ch2-Akane	QTL	-	-	50.9 cM
Apple-OA-F1-Akane.AK6	qRP.OA-ch6-Akane	QTL	-	-	36.3 cM
Apple-OA-F1-Akane.AK15	qRP.OA-ch15-Akane	QTL	-	-	87 cM
Apple-OA-F1-Akane.AK9	qFSC.OA-ch9-Akane	QTL	-	-	69.4 cM
Apple-OA-F1-Akane.AK16	qFSC.OA-ch16-Akane	QTL	-	-	15.5 cM
Apple-OA-F1-Akane.AK3	qFRFRM.OA-ch3-Akane	QTL	-	-	74.2 cM
Apple-OA-F1-Akane.AK5	qPFD.OA-ch5-Akane	QTL	-	-	16.1 cM
Apple-OA-F1-Akane.AK8	qTITA.OA-ch8-Akane	QTL	-	-	26.8 cM
Apple-OA-F1-Akane.AK15	qTITA.OA-ch15-Akane	QTL	-	-	42.7 cM
Apple-OA-F1-Akane.AK16	qTITA.OA-ch16-Akane	QTL	-	-	6.2 cM
Apple-OA-F1-Akane.AK16	qSSC.OA-ch16-Akane	QTL	-	-	22 cM
Apple-OA-F1-Akane.AK10	qSUC.OA-ch10-Akane	QTL	-	-	26.3 cM
Apple-OA-F1-Akane.AK15	qSUC.OA-ch15-Akane	QTL	-	-	92.5 cM
Apple-OA-F1-Akane.AK5	qGLC.OA-ch5-Akane	QTL	-	-	0 cM
Apple-OA-F1-Akane.AK6	qFRU.OA-ch6-Akane	QTL	-	-	8.6 cM
Apple-OA-F1-Akane.AK16	qFRU.OA-ch16-Akane	QTL	-	-	18.5 cM
Apple-OA-F1-Akane.AK16	qSOR.OA-ch16-Akane	QTL	-	-	15.5 cM
Apple-OA-F1-Akane.AK10	qJB.OA-ch10-Akane	QTL	-	-	19.3 cM
Apple-OA-F1-Akane.AK16	qJB.OA-ch16-Akane	QTL	-	-	9.3 cM
Apple-OA-F1-Akane.AK15	qFD.OA-ch15-Akane	QTL	-	-	86.3 cM

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