Prunus-TE-6K cherry SNP-estimate | GDR

Map Overview


Name	Prunus-TE-6K cherry SNP-estimate
Species	Prunus persica Prunus dulcis
Map type	genetic
Population type	F2
Map unit	cM
Maternal parent	Texas
Paternal parent	Earlygold
Population size	111
Number of loci	5696
Number of QTL	7
Number of linkage groups	8
Publication	[view all]
Contact	Cameron Peace

Stock

Name

Type

Details

Texas_x_Earlygold-F2

population

Description:	F2 population obtained by selfing the F1 hybrid plant ‘MB 1.37’ (almond ‘Texas’ 3 peach ‘Earlygold’)
Population size:	111
Alias:	TxE

Contact

Name

Details

Cameron Peace

First name:	Cameron
Last name:	Peace
Title:	Professor
Institution:	Washington State University
Address:	Department of Horticulture, Washington State University, Pullman, Washington, United States of America
Country:	USA
Email:	cpeace@wsu.edu

Publication


Year	Publications
2012	Peace C, Bassil N, Main D, Ficklin S, Rosyara UR, Stegmeir T, Sebolt A, Gilmore B, Lawley C, Mockler TC, Bryant DW, Wilhelm L, Iezzoni A. Development and evaluation of a genome-wide 6K SNP array for diploid sweet cherry and tetraploid sour cherry. PloS one. 2012; 7(12):e48305.
2017	Mgbechi-Ezeri J, Porter L, Johnson KB, Oraguzie N. Assessment of sweet cherry (Prunus avium L.) genotypes for response to bacterial canker disease. Euphytica. 2017; 213:145.

Map Loci

This map contains 5,696 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_f_Pp8_17018389	RosBREED_snp_tart_cherry_f_Pp8_17018389	marker_locus	39.25 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17048109	RosBREED_snp_sweet_cherry_Pp8_17048109	marker_locus	39.5 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_a_Pp8_17065642	RosBREED_snp_tart_cherry_a_Pp8_17065642	marker_locus	39.65 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17075727	RosBREED_snp_sweet_cherry_Pp8_17075727	marker_locus	39.74 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17099840	RosBREED_snp_sweet_cherry_Pp8_17099840	marker_locus	39.94 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_a_Pp8_17114381	RosBREED_snp_tart_cherry_a_Pp8_17114381	marker_locus	40.07 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17124002	RosBREED_snp_sweet_cherry_Pp8_17124002	marker_locus	40.15 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_f_Pp8_17138877	RosBREED_snp_tart_cherry_f_Pp8_17138877	marker_locus	40.28 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17171307	RosBREED_snp_sweet_cherry_Pp8_17171307	marker_locus	40.55 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17225621	RosBREED_snp_sweet_cherry_Pp8_17225621	marker_locus	40.96 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17256412	RosBREED_snp_sweet_cherry_Pp8_17256412	marker_locus	41.11 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_f_Pp8_17266837	RosBREED_snp_tart_cherry_f_Pp8_17266837	marker_locus	41.15 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17276429	RosBREED_snp_sweet_cherry_Pp8_17276429	marker_locus	41.2 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_a_Pp8_17276996	RosBREED_snp_tart_cherry_a_Pp8_17276996	marker_locus	41.2 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17307331	RosBREED_snp_sweet_cherry_Pp8_17307331	marker_locus	41.34 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17333300	RosBREED_snp_sweet_cherry_Pp8_17333300	marker_locus	41.46 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17359453	RosBREED_snp_sweet_cherry_Pp8_17359453	marker_locus	41.58 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_a_Pp8_17365629	RosBREED_snp_tart_cherry_a_Pp8_17365629	marker_locus	41.61 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17376854	RosBREED_snp_sweet_cherry_Pp8_17376854	marker_locus	41.66 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_f_Pp8_17386133	RosBREED_snp_tart_cherry_f_Pp8_17386133	marker_locus	41.7 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_a_Pp8_17464791	RosBREED_snp_tart_cherry_a_Pp8_17464791	marker_locus	42.07 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17467401	RosBREED_snp_sweet_cherry_Pp8_17467401	marker_locus	42.08 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_sweet_cherry_Pp8_17492237	RosBREED_snp_sweet_cherry_Pp8_17492237	marker_locus	42.19 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_f_Pp8_17498192	RosBREED_snp_tart_cherry_f_Pp8_17498192	marker_locus	42.22 cM
Prunus-TE-6K cherry SNP-estimate.8	RosBREED_snp_tart_cherry_a_Pp8_17501787	RosBREED_snp_tart_cherry_a_Pp8_17501787	marker_locus	42.24 cM

Page

...

222

Map QTL

This map contains 7 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
Prunus-TE-6K cherry SNP-estimate.2	qRPSS.TE-LG2.1	QTL	20 cM	35 cM	28 cM
Prunus-TE-6K cherry SNP-estimate.2	qRPSS.TE-LG2.2	QTL	40 cM	46 cM	43 cM
Prunus-TE-6K cherry SNP-estimate.3	qRPSS.TE-LG3.1	QTL	35 cM	46 cM	44 cM
Prunus-TE-6K cherry SNP-estimate.5	qRPSS.TE-LG5.1	QTL	2 cM	13 cM	9 cM
Prunus-TE-6K cherry SNP-estimate.5	qRPSS.TE-LG5.2	QTL	24 cM	40 cM	27 cM
Prunus-TE-6K cherry SNP-estimate.7	qRPSS.TE-LG7.1	QTL	3 cM	7 cM	5 cM
Prunus-TE-6K cherry SNP-estimate.8	qRPSS.TE-LG8.1	QTL	34 cM	55 cM	39 cM

Page

1

View Map