Apple-M432-2013 | GDR

Map Overview


Name	Apple-M432-2013
Species	Malus x domestica
Map type	genetic
Population type	F1
Map unit	cM
Maternal parent	M.27
Paternal parent	M.116
Number of loci	797
Number of linkage groups	17
Publication	[view all]
Contact	Daniel Sargent

Stock

Name

Type

Details

population

Contact

Name

Details

Daniel Sargent

First name:	Daniel
Last name:	Sargent
Title:	researcher
Institution:	East Malling Research (EMR)
Address:	New Road, East Malling, Kent ME19 6BJ, UK
Country:	Itlay
Email:	dan.sargent@emr.ac.uk

Publication


Year	Publications
2013	Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fernández FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.

Map Loci

This map contains 797 marker loci:

Download Table


Linkage Group	Marker Name	Locus Name	Type	Position
Apple-M432-2013.7	RosBREEDSNP_SNP_TG_31146800_Lg12_01759_MAF10_MDP0000663289_exon1	RosBREEDSNP_SNP_TG_31146800_Lg12_01759_MAF10_MDP0000663289_exon1	marker_locus	7.69 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_AG_3860536_Lg7_RosCOS418_MAF40_MDP0000281358_exon1	RosBREEDSNP_SNP_AG_3860536_Lg7_RosCOS418_MAF40_MDP0000281358_exon1	marker_locus	9.65 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_CT_28113435_Lg1_108136_MAF30_108136_exon1	RosBREEDSNP_SNP_CT_28113435_Lg1_108136_MAF30_108136_exon1	marker_locus	9.71 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_TC_4180170_Lg7_RosCOS3240_MAF50_MDP0000127900_exon4	RosBREEDSNP_SNP_TC_4180170_Lg7_RosCOS3240_MAF50_MDP0000127900_exon4	marker_locus	10.73 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_AC_4393940_Lg7_01170_MAF30_MDP0000696109_exon3	RosBREEDSNP_SNP_AC_4393940_Lg7_01170_MAF30_MDP0000696109_exon3	marker_locus	11.04 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_TC_6102142_Lg7_01988_MAF30_MDP0000154685_exon3	RosBREEDSNP_SNP_TC_6102142_Lg7_01988_MAF30_MDP0000154685_exon3	marker_locus	11.39 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_CT_5721533_Lg17_00606_MAF30_10746_exon1	RosBREEDSNP_SNP_CT_5721533_Lg17_00606_MAF30_10746_exon1	marker_locus	11.53 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_AG_4477859_Lg7_8384__8384_exon1	RosBREEDSNP_SNP_AG_4477859_Lg7_8384__8384_exon1	marker_locus	11.63 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_TC_6098706_Lg7_01988_MAF30_MDP0000220903_exon1	RosBREEDSNP_SNP_TC_6098706_Lg7_01988_MAF30_MDP0000220903_exon1	marker_locus	11.68 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_GA_35134996_Lg5_62137_MAF20_62137_exon1	RosBREEDSNP_SNP_GA_35134996_Lg5_62137_MAF20_62137_exon1	marker_locus	12.64 cM
Apple-M432-2013.7	Pear_Bartlett_RosBREEDSNP_SNP_CT_423_5093752	Pear_Bartlett_RosBREEDSNP_SNP_CT_423_5093752	marker_locus	14.79 cM
Apple-M432-2013.7	Pear_Bartlett_RosBREEDSNP_SNP_GA_154_5103263	Pear_Bartlett_RosBREEDSNP_SNP_GA_154_5103263	marker_locus	15.06 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_AG_7131583_Lg7_01872_MAF40_1648950_exon1	RosBREEDSNP_SNP_AG_7131583_Lg7_01872_MAF40_1648950_exon1	marker_locus	15.72 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_GA_2305855_Lg16_00719_MAF30_767049_exon1	RosBREEDSNP_SNP_GA_2305855_Lg16_00719_MAF30_767049_exon1	marker_locus	16.59 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_AG_8026567_Lg7_02619_MAF10_MDP0000322530_exon2	RosBREEDSNP_SNP_AG_8026567_Lg7_02619_MAF10_MDP0000322530_exon2	marker_locus	18.01 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_TG_9956676_Lg7_328139_MAF20_328139_exon1	RosBREEDSNP_SNP_TG_9956676_Lg7_328139_MAF20_328139_exon1	marker_locus	20.24 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_GT_9956304_Lg7_328139_MAF20_328139_exon1	RosBREEDSNP_SNP_GT_9956304_Lg7_328139_MAF20_328139_exon1	marker_locus	20.66 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_CT_9259306_Lg7_RosCOS2471_MAF50_MDP0000308927_exon2	RosBREEDSNP_SNP_CT_9259306_Lg7_RosCOS2471_MAF50_MDP0000308927_exon2	marker_locus	21.77 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_GA_9254965_Lg7_RosCOS2471_MAF50_MDP0000308927_exon4	RosBREEDSNP_SNP_GA_9254965_Lg7_RosCOS2471_MAF50_MDP0000308927_exon4	marker_locus	21.77 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_GA_25671752_Lg2_01935_MAF10_1619549_exon3	RosBREEDSNP_SNP_GA_25671752_Lg2_01935_MAF10_1619549_exon3	marker_locus	22.5 cM
Apple-M432-2013.7	snpEB106582	snpEB106582	marker_locus	22.72 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_GT_11564786_Lg7_266124__266124_exon3	RosBREEDSNP_SNP_GT_11564786_Lg7_266124__266124_exon3	marker_locus	24.55 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_CA_11564586_Lg7_266124_MAF10_266124_exon2	RosBREEDSNP_SNP_CA_11564586_Lg7_266124_MAF10_266124_exon2	marker_locus	24.6 cM
Apple-M432-2013.7	RosBREED_RosBREEDSNP_SNP_AG_22298896_Lg5	RosBREED_RosBREEDSNP_SNP_AG_22298896_Lg5	marker_locus	25.41 cM
Apple-M432-2013.7	RosBREEDSNP_SNP_CT_11043303_Lg7_01882_MAF20_546862_exon1	RosBREEDSNP_SNP_CT_11043303_Lg7_01882_MAF20_546862_exon1	marker_locus	26.93 cM

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