Apple-M432-2013

Map Overview

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NameApple-M432-2013
SpeciesMalus x domestica
Map typegenetic
Population typeF1
Map unitcM
Maternal parentM.27
Paternal parentM.116
Number of loci797
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 797 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013.12RosBREEDSNP_SNP_GA_3500620_Lg12_01391_MAF10_1628463_exon1RosBREEDSNP_SNP_GA_3500620_Lg12_01391_MAF10_1628463_exon1marker_locus6.55 cM
Apple-M432-2013.12RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2RosBREEDSNP_SNP_TC_3538550_Lg12_01391_MAF40_1676938_exon2marker_locus7.07 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GT_6130026_Lg14_02706_MAF30_1663732_exon1RosBREEDSNP_SNP_GT_6130026_Lg14_02706_MAF30_1663732_exon1marker_locus8.32 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2RosBREEDSNP_SNP_GA_5387988_Lg12_02212_MAF10_393859_exon2marker_locus10.29 cM
Apple-M432-2013.12RosBREED_RosBREEDSNP_SNP_TC_7202016_Lg17RosBREED_RosBREEDSNP_SNP_TC_7202016_Lg17marker_locus12.35 cM
Apple-M432-2013.12RosBREEDSNP_SNP_AG_7044670_Lg12_159023_MAF40_159023_exon1RosBREEDSNP_SNP_AG_7044670_Lg12_159023_MAF40_159023_exon1marker_locus13.24 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GA_7044610_Lg12_159023_MAF20_159023_exon1RosBREEDSNP_SNP_GA_7044610_Lg12_159023_MAF20_159023_exon1marker_locus14.17 cM
Apple-M432-2013.12RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3RosBREEDSNP_SNP_TC_13297391_Lg4_RosCOS3641_MAF30_MDP0000794353_exon3marker_locus16.8 cM
Apple-M432-2013.12RosBREEDSNP_SNP_TG_7915209_Lg6_01954_MAF20_MDP0000240981_exon4RosBREEDSNP_SNP_TG_7915209_Lg6_01954_MAF20_MDP0000240981_exon4marker_locus17.36 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GT_12543592_Lg12_MDP0000210506_MAF30_MDP0000210506_exon2RosBREEDSNP_SNP_GT_12543592_Lg12_MDP0000210506_MAF30_MDP0000210506_exon2marker_locus19.86 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GA_12543650_Lg12_MDP0000210506_MAF20_MDP0000210506_exon2RosBREEDSNP_SNP_GA_12543650_Lg12_MDP0000210506_MAF20_MDP0000210506_exon2marker_locus19.86 cM
Apple-M432-2013.12RosBREEDSNP_SNP_CA_12543851_Lg12_MDP0000210506_MAF20_MDP0000210506_exon2RosBREEDSNP_SNP_CA_12543851_Lg12_MDP0000210506_MAF20_MDP0000210506_exon2marker_locus19.86 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GA_35135007_Lg5_62137_MAF20_62137_exon1RosBREEDSNP_SNP_GA_35135007_Lg5_62137_MAF20_62137_exon1marker_locus20.36 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GA_5683344_Lg17_00606_MAF10_MDP0000486718_exon1RosBREEDSNP_SNP_GA_5683344_Lg17_00606_MAF10_MDP0000486718_exon1marker_locus26.09 cM
Apple-M432-2013.12Pear_Bartlett_RosBREEDSNP_SNP_CT_234_5105104Pear_Bartlett_RosBREEDSNP_SNP_CT_234_5105104marker_locus26.25 cM
Apple-M432-2013.12RosBREEDSNP_SNP_TG_21317748_Lg12_01426_MAF20_411066_exon1SNP_TG_21317748_Lg12_01426_MAF20_411066_exon1marker_locus26.57 cM
Apple-M432-2013.12RosBREEDSNP_SNP_TC_21387181_Lg12_01426_MAF40_1680072_exon2RosBREEDSNP_SNP_TC_21387181_Lg12_01426_MAF40_1680072_exon2marker_locus26.92 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GA_23976782_Lg12_01798_MAF10_MDP0000146103_exon2RosBREEDSNP_SNP_GA_23976782_Lg12_01798_MAF10_MDP0000146103_exon2marker_locus31.9 cM
Apple-M432-2013.12RosBREEDSNP_SNP_CT_29063582_Lg12_00334_MAF40_1650968_exon1RosBREEDSNP_SNP_CT_29063582_Lg12_00334_MAF40_1650968_exon1marker_locus34.64 cM
Apple-M432-2013.12RosBREEDSNP_SNP_CA_29070012_Lg12_00334_MAF30_MDP0000163756_exon2RosBREEDSNP_SNP_CA_29070012_Lg12_00334_MAF30_MDP0000163756_exon2marker_locus34.64 cM
Apple-M432-2013.12RosBREEDSNP_SNP_CT_29019870_Lg12_01769_MAF20_491569_exon2RosBREEDSNP_SNP_CT_29019870_Lg12_01769_MAF20_491569_exon2marker_locus35.95 cM
Apple-M432-2013.12RosBREEDSNP_SNP_GT_13099646_Lg1_01494_MAF40_464452_exon1RosBREEDSNP_SNP_GT_13099646_Lg1_01494_MAF40_464452_exon1marker_locus37.97 cM
Apple-M432-2013.12RosBREEDSNP_SNP_AG_21422131_Lg4_01558_MAF30_MDP0000270110_exon4SNP_AG_21422131_Lg4_01558_MAF30_MDP0000270110_exon4marker_locus44.91 cM
Apple-M432-2013.12FFRJ0CP02EF3PU_120FFRJ0CP02EF3PU_120marker_locus45.71 cM
Apple-M432-2013.12RosBREEDSNP_SNP_CT_32711249_Lg12_00840_MAF20_573182_exon1RosBREEDSNP_SNP_CT_32711249_Lg12_00840_MAF20_573182_exon1marker_locus46.3 cM
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Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
Cross References
External references for this map
DatabaseAccession
GDR CMap164
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