Apple-M432-2013-physical-Malus-domestica

Map Overview

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NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 750 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_112151_Lg1_00288_MAF30_MDP0000524001_exon1RosBREEDSNP_SNP_CT_112151_Lg1_00288_MAF30_MDP0000524001_exon1marker_locus112151 bp
Apple-M432-2013-physical-Malus-domestica.1GDsnp00288GDsnp00288marker_locus154686 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_154698_Lg1_00288_MAF50_285078_exon1SNP_CT_154698_Lg1_00288_MAF50_285078_exon1marker_locus154698 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1RosBREEDSNP_SNP_CT_1517899_Lg1_245534_MAF10_245534_exon1marker_locus1517899 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_5234401_Lg1_01826_MAF30_MDP0000301847_exon4RosBREEDSNP_SNP_GA_5234401_Lg1_01826_MAF30_MDP0000301847_exon4marker_locus5234401 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_5852068_Lg1_00152_MAF20_MDP0000220135_exon3RosBREEDSNP_SNP_GA_5852068_Lg1_00152_MAF20_MDP0000220135_exon3marker_locus5852068 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_5860779_Lg1_00152_MAF10_MDP0000483599_exon1RosBREEDSNP_SNP_CT_5860779_Lg1_00152_MAF10_MDP0000483599_exon1marker_locus5860779 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TG_9938879_Lg1_RosCOS404_MAF30_563387_exon1RosBREEDSNP_SNP_TG_9938879_Lg1_RosCOS404_MAF30_563387_exon1marker_locus9938879 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_9976748_Lg1_RosCOS404_MAF30_MDP0000188908_exon1RosBREEDSNP_SNP_CT_9976748_Lg1_RosCOS404_MAF30_MDP0000188908_exon1marker_locus9976748 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_AG_10421935_Lg1_RosCOS3195_MAF20_411069_exon1RosBREEDSNP_SNP_AG_10421935_Lg1_RosCOS3195_MAF20_411069_exon1marker_locus10421935 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TC_12162359_Lg1_00420_MAF30_MDP0000205356_exon1RosBREEDSNP_SNP_TC_12162359_Lg1_00420_MAF30_MDP0000205356_exon1marker_locus12162359 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_12166178_Lg1_00420_MAF10_1645316_exon1RosBREEDSNP_SNP_GA_12166178_Lg1_00420_MAF10_1645316_exon1marker_locus12166178 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1marker_locus12378938 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GT_13099646_Lg1_01494_MAF40_464452_exon1RosBREEDSNP_SNP_GT_13099646_Lg1_01494_MAF40_464452_exon1marker_locus13099646 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TC_14006533_Lg1_01889_MAF20_MDP0000263325_exon3RosBREEDSNP_SNP_TC_14006533_Lg1_01889_MAF20_MDP0000263325_exon3marker_locus14006533 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GT_14657993_Lg1_RosCOS1779_MAF30_MDP0000119296_exon1RosBREEDSNP_SNP_GT_14657993_Lg1_RosCOS1779_MAF30_MDP0000119296_exon1marker_locus14657993 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3marker_locus14755288 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_14833187_Lg1_01500_MAF20_1625667_exon2RosBREEDSNP_SNP_GA_14833187_Lg1_01500_MAF20_1625667_exon2marker_locus14833187 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TC_16605968_Lg1_02538_MAF20_1649659_exon1RosBREEDSNP_SNP_TC_16605968_Lg1_02538_MAF20_1649659_exon1marker_locus16605968 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TC_16628559_Lg1_02538_MAF40_MDP0000495165_exon1RosBREEDSNP_SNP_TC_16628559_Lg1_02538_MAF40_MDP0000495165_exon1marker_locus16628559 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1RosBREEDSNP_SNP_TC_16998097_Lg1_MDP0000595715__MDP0000595715_exon1marker_locus16998097 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_AG_17236158_Lg1_RosCOS3372_MAF30_45786_exon1RosBREEDSNP_SNP_AG_17236158_Lg1_RosCOS3372_MAF30_45786_exon1marker_locus17236158 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GT_17264077_Lg1_RosCOS3372_MAF50_762097_exon1RosBREEDSNP_SNP_GT_17264077_Lg1_RosCOS3372_MAF50_762097_exon1marker_locus17264077 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_CT_17847470_Lg1_RosCOS3660_MAF20_389966_exon1RosBREEDSNP_SNP_CT_17847470_Lg1_RosCOS3660_MAF20_389966_exon1marker_locus17847470 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4RosBREEDSNP_SNP_TC_17886905_Lg1_00440_MAF20_MDP0000319069_exon4marker_locus17886905 bp
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Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
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