Apple-M432-2013-physical-Malus-domestica

Map Overview

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NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 750 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_AC_27018761_Lg13_MDP0000163961__MDP0000163961_exon1RosBREEDSNP_SNP_AC_27018761_Lg13_MDP0000163961__MDP0000163961_exon1marker_locus27018761 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_27126226_Lg13_MDP0000716623_MAF50_MDP0000716623_exon1RosBREEDSNP_SNP_TC_27126226_Lg13_MDP0000716623_MAF50_MDP0000716623_exon1marker_locus27126226 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TG_32835665_Lg13_02890_MAF50_MDP0000445994_exon1RosBREEDSNP_SNP_TG_32835665_Lg13_02890_MAF50_MDP0000445994_exon1marker_locus32835665 bp
Apple-M432-2013-physical-Malus-domestica.13GDsnp02487GDsnp02487marker_locus33224925 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_AG_34564727_Lg13_MDP0000128682__MDP0000128682_exon1SNP_AG_34564727_Lg13_MDP0000128682__MDP0000128682_exon1marker_locus34564727 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_CT_35001874_Lg13_01899_MAF40_MDP0000667911_exon1RosBREEDSNP_SNP_CT_35001874_Lg13_01899_MAF40_MDP0000667911_exon1marker_locus35001874 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_CT_193261_Lg14_01888_MAF10_1639004_exon1RosBREEDSNP_SNP_CT_193261_Lg14_01888_MAF10_1639004_exon1marker_locus193261 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_CA_195425_Lg14_01888_MAF20_1660271_exon1RosBREEDSNP_SNP_CA_195425_Lg14_01888_MAF20_1660271_exon1marker_locus195425 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_CT_238231_Lg14_01888_MAF50_1669462_exon1RosBREEDSNP_SNP_CT_238231_Lg14_01888_MAF50_1669462_exon1marker_locus238231 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_AG_635156_Lg14_AT2_MAF20_MDP0000475891_exon1RosBREEDSNP_SNP_AG_635156_Lg14_AT2_MAF20_MDP0000475891_exon1marker_locus635156 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_CT_2110465_Lg14_01846_MAF30_1669065_exon1RosBREEDSNP_SNP_CT_2110465_Lg14_01846_MAF30_1669065_exon1marker_locus2110465 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_CT_2138918_Lg14_01846_MAF30_506172_exon1SNP_CT_2138918_Lg14_01846_MAF30_506172_exon1marker_locus2138918 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_GT_6130026_Lg14_02706_MAF30_1663732_exon1RosBREEDSNP_SNP_GT_6130026_Lg14_02706_MAF30_1663732_exon1marker_locus6130026 bp
Apple-M432-2013-physical-Malus-domestica.14GDsnp02706GDsnp02706marker_locus6148971 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_AG_6473268_Lg14_01401_MAF30_1657233_exon1RosBREEDSNP_SNP_AG_6473268_Lg14_01401_MAF30_1657233_exon1marker_locus6473268 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_GA_11372671_Lg14_02214_MAF20_MDP0000286281_exon6RosBREEDSNP_SNP_GA_11372671_Lg14_02214_MAF20_MDP0000286281_exon6marker_locus11372671 bp
Apple-M432-2013-physical-Malus-domestica.14GDsnp02214GDsnp02214marker_locus11385059 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_TC_11411461_Lg14_02214_MAF10_100822_exon1RosBREEDSNP_SNP_TC_11411461_Lg14_02214_MAF10_100822_exon1marker_locus11411461 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_AG_12461628_Lg14_02638_MAF30_MDP0000617779_exon1RosBREEDSNP_SNP_AG_12461628_Lg14_02638_MAF30_MDP0000617779_exon1marker_locus12461628 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_CA_12465976_Lg14_02638_MAF30_MDP0000458400_exon3RosBREEDSNP_SNP_CA_12465976_Lg14_02638_MAF30_MDP0000458400_exon3marker_locus12465976 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_CT_16037279_Lg14_20974__20974_exon1RosBREEDSNP_SNP_CT_16037279_Lg14_20974__20974_exon1marker_locus16037279 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_TC_21205767_Lg14_01522_MAF40_180359_exon1RosBREEDSNP_SNP_TC_21205767_Lg14_01522_MAF40_180359_exon1marker_locus21205767 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_GA_21874355_Lg14_02366_MAF20_MDP0000278672_exon1RosBREEDSNP_SNP_GA_21874355_Lg14_02366_MAF20_MDP0000278672_exon1marker_locus21874355 bp
Apple-M432-2013-physical-Malus-domestica.14GDsnp00522GDsnp00522marker_locus22011006 bp
Apple-M432-2013-physical-Malus-domestica.14RosBREEDSNP_SNP_GA_23443053_Lg14_00062_MAF40_1688347_exon5RosBREEDSNP_SNP_GA_23443053_Lg14_00062_MAF40_1688347_exon5marker_locus23443053 bp
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Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
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