Apple-M432-2013-physical-Malus-domestica

Map Overview

Click on any linkage group to explore this map further. You will be taken to MapViewer and leave this page.

NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 750 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_AC_23074147_Lg2_RosCOS292_MAF20_MDP0000590787_exon1RosBREEDSNP_SNP_AC_23074147_Lg2_RosCOS292_MAF20_MDP0000590787_exon1marker_locus23074147 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_CT_24750920_Lg2_00833_MAF10_59585_exon1RosBREEDSNP_SNP_CT_24750920_Lg2_00833_MAF10_59585_exon1marker_locus24750920 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_GA_25671752_Lg2_01935_MAF10_1619549_exon3RosBREEDSNP_SNP_GA_25671752_Lg2_01935_MAF10_1619549_exon3marker_locus25671752 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_TC_27298641_Lg2_02271_MAF40_952256_exon1RosBREEDSNP_SNP_TC_27298641_Lg2_02271_MAF40_952256_exon1marker_locus27298641 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_GA_32422302_Lg2_327917_MAF30_327917_exon1RosBREEDSNP_SNP_GA_32422302_Lg2_327917_MAF30_327917_exon1marker_locus32422302 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_AG_32422411_Lg2_327917_MAF30_327917_exon1RosBREEDSNP_SNP_AG_32422411_Lg2_327917_MAF30_327917_exon1marker_locus32422411 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_TG_32981524_Lg2_02223_MAF20_MDP0000491627_exon1RosBREEDSNP_SNP_TG_32981524_Lg2_02223_MAF20_MDP0000491627_exon1marker_locus32981524 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_AG_33487877_Lg2_167070_MAF10_167070_exon1RosBREEDSNP_SNP_AG_33487877_Lg2_167070_MAF10_167070_exon1marker_locus33487877 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_GA_33959044_Lg2_01349_MAF40_MDP0000402893_exon1RosBREEDSNP_SNP_GA_33959044_Lg2_01349_MAF40_MDP0000402893_exon1marker_locus33959044 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1RosBREEDSNP_SNP_GA_34176489_Lg2_RosCOS2050_MAF20_41201_exon1marker_locus34176489 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_AC_35533813_Lg2_00267_MAF10_MDP0000465049_exon1RosBREEDSNP_SNP_AC_35533813_Lg2_00267_MAF10_MDP0000465049_exon1marker_locus35533813 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_CT_36168224_Lg2_00914_MAF10_614353_exon2RosBREEDSNP_SNP_CT_36168224_Lg2_00914_MAF10_614353_exon2marker_locus36168224 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_CT_38935589_Lg2_00995_MAF30_MDP0000211904_exon5RosBREEDSNP_SNP_CT_38935589_Lg2_00995_MAF30_MDP0000211904_exon5marker_locus38935589 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_GA_39231189_Lg2_01938_MAF20_MDP0000277119_exon2RosBREEDSNP_SNP_GA_39231189_Lg2_01938_MAF20_MDP0000277119_exon2marker_locus39231189 bp
Apple-M432-2013-physical-Malus-domestica.2GDsnp00167GDsnp00167marker_locus39532579 bp
Apple-M432-2013-physical-Malus-domestica.2RosBREEDSNP_SNP_AC_40130375_Lg2_02535_MAF50_MDP0000389749_exon1RosBREEDSNP_SNP_AC_40130375_Lg2_02535_MAF50_MDP0000389749_exon1marker_locus40130375 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_CT_1611891_Lg3_EH034548_MAF30_1687561_exon1RosBREEDSNP_SNP_CT_1611891_Lg3_EH034548_MAF30_1687561_exon1marker_locus1611891 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_GA_1636499_Lg3_EH034548_MAF10_MDP0000448299_exon2RosBREEDSNP_SNP_GA_1636499_Lg3_EH034548_MAF10_MDP0000448299_exon2marker_locus1636499 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_TC_1682643_Lg3_EB140229_MAF30_145018_exon1RosBREEDSNP_SNP_TC_1682643_Lg3_EB140229_MAF30_145018_exon1marker_locus1682643 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_CT_2449342_Lg3_RosCOS1398_MAF20_MDP0000188698_exon9RosBREEDSNP_SNP_CT_2449342_Lg3_RosCOS1398_MAF20_MDP0000188698_exon9marker_locus2449342 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_GA_2615242_Lg3_02300_MAF30_368029_exon1RosBREEDSNP_SNP_GA_2615242_Lg3_02300_MAF30_368029_exon1marker_locus2615242 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_CA_2618360_Lg3_02300_MAF20_428644_exon2RosBREEDSNP_SNP_CA_2618360_Lg3_02300_MAF20_428644_exon2marker_locus2618360 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_AG_2627039_Lg3_02300_MAF20_MDP0000206447_exon4RosBREEDSNP_SNP_AG_2627039_Lg3_02300_MAF20_MDP0000206447_exon4marker_locus2627039 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_AC_2646455_Lg3_02300_MAF40_1630359_exon1RosBREEDSNP_SNP_AC_2646455_Lg3_02300_MAF40_1630359_exon1marker_locus2646455 bp
Apple-M432-2013-physical-Malus-domestica.3RosBREEDSNP_SNP_CA_4828642_Lg3_00276_MAF10_1650518_exon1RosBREEDSNP_SNP_CA_4828642_Lg3_00276_MAF10_1650518_exon1marker_locus4828642 bp
Page
...
19
...
Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
View Map