Apple-M432-2013-physical-Malus-domestica

Map Overview

Click on any linkage group to explore this map further. You will be taken to MapViewer and leave this page.

NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 750 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_35492705_Lg1_02092_MAF50_1666970_exon1RosBREEDSNP_SNP_GA_35492705_Lg1_02092_MAF50_1666970_exon1marker_locus35492705 bp
Apple-M432-2013-physical-Malus-domestica.1RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1RosBREEDSNP_SNP_GA_35939914_Lg1_12966_MAF40_12966_exon1marker_locus35939914 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREED_RosBREEDSNP_SNP_AG_64597_Lg10RosBREED_RosBREEDSNP_SNP_AG_64597_Lg10marker_locus64597 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_829546_Lg10_00106_MAF40_332480_exon1RosBREEDSNP_SNP_CT_829546_Lg10_00106_MAF40_332480_exon1marker_locus829546 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_1301573_Lg10_RosCOS2296_MAF20_233424_exon1RosBREEDSNP_SNP_CT_1301573_Lg10_RosCOS2296_MAF20_233424_exon1marker_locus1301573 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_2436431_Lg10_01909_MAF40_MDP0000381010_exon1RosBREEDSNP_SNP_TC_2436431_Lg10_01909_MAF40_MDP0000381010_exon1marker_locus2436431 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_2609621_Lg10_00839_MAF20_1656281_exon2RosBREEDSNP_SNP_CT_2609621_Lg10_00839_MAF20_1656281_exon2marker_locus2609621 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1RosBREEDSNP_SNP_TC_2791748_Lg10_00056_MAF50_1665906_exon1marker_locus2791748 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_4013035_Lg10_01810_MAF30_MDP0000256461_exon3RosBREEDSNP_SNP_TC_4013035_Lg10_01810_MAF30_MDP0000256461_exon3marker_locus4013035 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AG_5396031_Lg10_327917_MAF30_327917_exon1RosBREEDSNP_SNP_AG_5396031_Lg10_327917_MAF30_327917_exon1marker_locus5396031 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_6990147_Lg10_127967_MAF50_127967_exon1RosBREEDSNP_SNP_CT_6990147_Lg10_127967_MAF50_127967_exon1marker_locus6990147 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_7121587_Lg10_02051_MAF30_MDP0000599316_exon1RosBREEDSNP_SNP_CT_7121587_Lg10_02051_MAF30_MDP0000599316_exon1marker_locus7121587 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_GA_7199471_Lg10_02051_MAF40_MDP0000169672_exon2RosBREEDSNP_SNP_GA_7199471_Lg10_02051_MAF40_MDP0000169672_exon2marker_locus7199471 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AG_7269986_Lg10_120493_MAF20_120493_exon2RosBREEDSNP_SNP_AG_7269986_Lg10_120493_MAF20_120493_exon2marker_locus7269986 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TG_8522809_Lg10_00260_MAF40_483111_exon1RosBREEDSNP_SNP_TG_8522809_Lg10_00260_MAF40_483111_exon1marker_locus8522809 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_8606832_Lg10_RosCOS1766_MAF30_158573_exon2RosBREEDSNP_SNP_TC_8606832_Lg10_RosCOS1766_MAF30_158573_exon2marker_locus8606832 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_9388261_Lg10_00875_MAF20_MDP0000180840_exon1RosBREEDSNP_SNP_CT_9388261_Lg10_00875_MAF20_MDP0000180840_exon1marker_locus9388261 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_GT_10702352_Lg10_01867_MAF20_591133_exon1RosBREEDSNP_SNP_GT_10702352_Lg10_01867_MAF20_591133_exon1marker_locus10702352 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_GA_10720575_Lg10_01867_MAF40_1682345_exon2RosBREEDSNP_SNP_GA_10720575_Lg10_01867_MAF40_1682345_exon2marker_locus10720575 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_11955594_Lg10_CXE1_MAF20_MDP0000119954_exon3RosBREEDSNP_SNP_TC_11955594_Lg10_CXE1_MAF20_MDP0000119954_exon3marker_locus11955594 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AG_13033111_Lg10_RosCOS724_MAF40_MDP0000193868_exon3RosBREEDSNP_SNP_AG_13033111_Lg10_RosCOS724_MAF40_MDP0000193868_exon3marker_locus13033111 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1RosBREEDSNP_SNP_TG_13048668_Lg10_RosCOS724_MAF30_1638650_exon1marker_locus13048668 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1RosBREEDSNP_SNP_TC_13051232_Lg10_RosCOS724_MAF10_806797_exon1marker_locus13051232 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1RosBREEDSNP_SNP_AG_13058388_Lg10_RosCOS724_MAF50_MDP0000598951_exon1marker_locus13058388 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AG_13793112_Lg10_snpEG631376_MAF30_MDP0000252318_exon4RosBREEDSNP_SNP_AG_13793112_Lg10_snpEG631376_MAF30_MDP0000252318_exon4marker_locus13793112 bp
Page
3
...
Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
View Map