Apple-M432-2013-physical-Malus-domestica

Map Overview

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NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 750 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TG_5372070_Lg9_00514_MAF20_1646977_exon3SNP_TG_5372070_Lg9_00514_MAF20_1646977_exon3marker_locus5372070 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TC_5391429_Lg9_00514_MAF30_502274_exon1RosBREEDSNP_SNP_TC_5391429_Lg9_00514_MAF30_502274_exon1marker_locus5391429 bp
Apple-M432-2013-physical-Malus-domestica.9GDsnp01603GDsnp01603marker_locus5981649 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TG_7597169_Lg9_00893_MAF40_87914_exon1RosBREEDSNP_SNP_TG_7597169_Lg9_00893_MAF40_87914_exon1marker_locus7597169 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_GA_7613095_Lg9_00893_MAF30_MDP0000225805_exon2RosBREEDSNP_SNP_GA_7613095_Lg9_00893_MAF30_MDP0000225805_exon2marker_locus7613095 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_GA_7705858_Lg9_01858_MAF30_MDP0000294257_exon4SNP_GA_7705858_Lg9_01858_MAF30_MDP0000294257_exon4marker_locus7705858 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_GA_8267478_Lg9_00337_MAF30_250085_exon1RosBREEDSNP_SNP_GA_8267478_Lg9_00337_MAF30_250085_exon1marker_locus8267478 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_GA_9982432_Lg9_02031_MAF10_MDP0000277628_exon1RosBREEDSNP_SNP_GA_9982432_Lg9_02031_MAF10_MDP0000277628_exon1marker_locus9982432 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_GA_9999842_Lg9_02031_MAF20_MDP0000126227_exon1RosBREEDSNP_SNP_GA_9999842_Lg9_02031_MAF20_MDP0000126227_exon1marker_locus9999842 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TC_11737183_Lg9_01755_MAF50_289100_exon2RosBREEDSNP_SNP_TC_11737183_Lg9_01755_MAF50_289100_exon2marker_locus11737183 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_AG_14340401_Lg9_02046_MAF40_MDP0000444322_exon1RosBREEDSNP_SNP_AG_14340401_Lg9_02046_MAF40_MDP0000444322_exon1marker_locus14340401 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_AG_15345285_Lg9_Hi01e10_MAF20_MDP0000229280_exon1RosBREEDSNP_SNP_AG_15345285_Lg9_Hi01e10_MAF20_MDP0000229280_exon1marker_locus15345285 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TC_15443131_Lg9_Hi01e10_MAF40_MDP0000624636_exon1RosBREEDSNP_SNP_TC_15443131_Lg9_Hi01e10_MAF40_MDP0000624636_exon1marker_locus15443131 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1RosBREEDSNP_SNP_CT_16990033_Lg9_01648_MAF10_MDP0000222742_exon1marker_locus16990033 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_CA_19818743_Lg9_02460_MAF50_MDP0000747574_exon2RosBREEDSNP_SNP_CA_19818743_Lg9_02460_MAF50_MDP0000747574_exon2marker_locus19818743 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_CT_19970380_Lg9_02100_MAF20_1681805_exon1RosBREEDSNP_SNP_CT_19970380_Lg9_02100_MAF20_1681805_exon1marker_locus19970380 bp
Apple-M432-2013-physical-Malus-domestica.9GDsnp02100GDsnp02100marker_locus20013404 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_CA_21623475_Lg9_02230_MAF40_1683198_exon1RosBREEDSNP_SNP_CA_21623475_Lg9_02230_MAF40_1683198_exon1marker_locus21623475 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_GT_24208118_Lg9_00053_MAF40_1659260_exon1RosBREEDSNP_SNP_GT_24208118_Lg9_00053_MAF40_1659260_exon1marker_locus24208118 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_CA_27835935_Lg9_02482_MAF30_166068_exon2RosBREEDSNP_SNP_CA_27835935_Lg9_02482_MAF30_166068_exon2marker_locus27835935 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TC_28606194_Lg9_02059_MAF40_MDP0000644952_exon1RosBREEDSNP_SNP_TC_28606194_Lg9_02059_MAF40_MDP0000644952_exon1marker_locus28606194 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2RosBREEDSNP_SNP_AG_29781241_Lg9_00467_MAF40_MDP0000508369_exon2marker_locus29781241 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TC_32549950_Lg9_01066_MAF30_MDP0000275261_exon10RosBREEDSNP_SNP_TC_32549950_Lg9_01066_MAF30_MDP0000275261_exon10marker_locus32549950 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TC_32851678_Lg9_MYB10_MAF20_MDP0000573302_exon2RosBREEDSNP_SNP_TC_32851678_Lg9_MYB10_MAF20_MDP0000573302_exon2marker_locus32851678 bp
Apple-M432-2013-physical-Malus-domestica.9RosBREEDSNP_SNP_TG_33061238_Lg9_01200_MAF50_376336_exon2RosBREEDSNP_SNP_TG_33061238_Lg9_01200_MAF50_376336_exon2marker_locus33061238 bp
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Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
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