Apple-M432-2013-physical-Malus-domestica

Map Overview

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NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 750 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AG_14065734_Lg10_ERS1_MAF30_1641299_exon1RosBREEDSNP_SNP_AG_14065734_Lg10_ERS1_MAF30_1641299_exon1marker_locus14065734 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3RosBREEDSNP_SNP_TC_14692206_Lg10_01267_MAF50_MDP0000639673_exon3marker_locus14692206 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_14946443_Lg10_00015_MAF10_MDP0000505985_exon1RosBREEDSNP_SNP_CT_14946443_Lg10_00015_MAF10_MDP0000505985_exon1marker_locus14946443 bp
Apple-M432-2013-physical-Malus-domestica.10GDsnp01710GDsnp01710marker_locus16714769 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AG_17594367_Lg10_01987_MAF40_1641049_exon6RosBREEDSNP_SNP_AG_17594367_Lg10_01987_MAF40_1641049_exon6marker_locus17594367 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CA_18510791_Lg10_01832_MAF30_1622972_exon5RosBREEDSNP_SNP_CA_18510791_Lg10_01832_MAF30_1622972_exon5marker_locus18510791 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_GA_20815691_Lg10_PG_MAF20_433322_exon1RosBREEDSNP_SNP_GA_20815691_Lg10_PG_MAF20_433322_exon1marker_locus20815691 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2RosBREEDSNP_SNP_CA_20822717_Lg10_PG_MAF30_1667167_exon2marker_locus20822717 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_21989766_Lg10_MDP0000131142_MAF10_MDP0000131142_exon1RosBREEDSNP_SNP_CT_21989766_Lg10_MDP0000131142_MAF10_MDP0000131142_exon1marker_locus21989766 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_GT_23278011_Lg10_RosCOS1786_MAF20_1648518_exon3RosBREEDSNP_SNP_GT_23278011_Lg10_RosCOS1786_MAF20_1648518_exon3marker_locus23278011 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_24276617_Lg10_RosCOS3104_MAF20_1624917_exon2RosBREEDSNP_SNP_CT_24276617_Lg10_RosCOS3104_MAF20_1624917_exon2marker_locus24276617 bp
Apple-M432-2013-physical-Malus-domestica.10GDsnp00971GDsnp00971marker_locus26549947 bp
Apple-M432-2013-physical-Malus-domestica.10GDsnp00346GDsnp00346marker_locus29921947 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_GA_30214912_Lg10_00734_MAF20_1651709_exon1RosBREEDSNP_SNP_GA_30214912_Lg10_00734_MAF20_1651709_exon1marker_locus30214912 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_30391137_Lg10_01299_MAF30_MDP0000119942_exon2RosBREEDSNP_SNP_CT_30391137_Lg10_01299_MAF30_MDP0000119942_exon2marker_locus30391137 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_CT_33490066_Lg10_01683_MAF20_1641026_exon8RosBREEDSNP_SNP_CT_33490066_Lg10_01683_MAF20_1641026_exon8marker_locus33490066 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_GA_33541820_Lg10_01683_MAF10_MDP0000744586_exon2RosBREEDSNP_SNP_GA_33541820_Lg10_01683_MAF10_MDP0000744586_exon2marker_locus33541820 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AC_34958317_Lg10_00258_MAF20_MDP0000125820_exon3RosBREEDSNP_SNP_AC_34958317_Lg10_00258_MAF20_MDP0000125820_exon3marker_locus34958317 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_35481496_Lg10_RosCOS663_MAF10_586118_exon1RosBREEDSNP_SNP_TC_35481496_Lg10_RosCOS663_MAF10_586118_exon1marker_locus35481496 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_AG_36033314_Lg10_186429_MAF40_186429_exon1RosBREEDSNP_SNP_AG_36033314_Lg10_186429_MAF40_186429_exon1marker_locus36033314 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1RosBREEDSNP_SNP_GT_36565723_Lg10_01761_MAF50_MDP0000879133_exon1marker_locus36565723 bp
Apple-M432-2013-physical-Malus-domestica.10RosBREEDSNP_SNP_TC_36587120_Lg10_01761_MAF40_274852_exon1RosBREEDSNP_SNP_TC_36587120_Lg10_01761_MAF40_274852_exon1marker_locus36587120 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1RosBREEDSNP_SNP_CA_480323_Lg11_01480_MAF40_1652429_exon1marker_locus480323 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1RosBREEDSNP_SNP_GA_3433852_Lg11_01167_MAF40_42738_exon1marker_locus3433852 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_AG_3436048_Lg11_01167_MAF10_476534_exon1RosBREEDSNP_SNP_AG_3436048_Lg11_01167_MAF10_476534_exon1marker_locus3436048 bp
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Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
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