Apple-M432-2013-physical-Malus-domestica

Map Overview

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NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 750 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_CT_22731798_Lg11_00743_MAF10_MDP0000573656_exon1RosBREEDSNP_SNP_CT_22731798_Lg11_00743_MAF10_MDP0000573656_exon1marker_locus22731798 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_CT_23845634_Lg11_10010_MAF10_MDP0000268864_exon1RosBREEDSNP_SNP_CT_23845634_Lg11_10010_MAF10_MDP0000268864_exon1marker_locus23845634 bp
Apple-M432-2013-physical-Malus-domestica.11GDsnp02407GDsnp02407marker_locus24599813 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_GA_26508753_Lg11_138333_MAF40_138333_exon1RosBREEDSNP_SNP_GA_26508753_Lg11_138333_MAF40_138333_exon1marker_locus26508753 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_AG_26508831_Lg11_138333_MAF20_138333_exon1SNP_AG_26508831_Lg11_138333_MAF20_138333_exon1marker_locus26508831 bp
Apple-M432-2013-physical-Malus-domestica.11GDsnp02800GDsnp02800marker_locus28409419 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1RosBREEDSNP_SNP_TC_28449600_Lg11_02800_MAF30_MDP0000571011_exon1marker_locus28449600 bp
Apple-M432-2013-physical-Malus-domestica.11GDsnp00662GDsnp00662marker_locus29787468 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_GA_30592203_Lg11_02838_MAF20_MDP0000171255_exon8RosBREEDSNP_SNP_GA_30592203_Lg11_02838_MAF20_MDP0000171255_exon8marker_locus30592203 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2RosBREEDSNP_SNP_TC_32999468_Lg11_00566_MAF40_MDP0000265225_exon2marker_locus32999468 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_TG_33459287_Lg11_02576_MAF50_382426_exon2RosBREEDSNP_SNP_TG_33459287_Lg11_02576_MAF50_382426_exon2marker_locus33459287 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_AC_34196762_Lg11_02910_MAF30_MDP0000718803_exon2RosBREEDSNP_SNP_AC_34196762_Lg11_02910_MAF30_MDP0000718803_exon2marker_locus34196762 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_GT_34226486_Lg11_02910_MAF20_1656183_exon1RosBREEDSNP_SNP_GT_34226486_Lg11_02910_MAF20_1656183_exon1marker_locus34226486 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_CA_34267142_Lg11_02910_MAF10_1657398_exon1RosBREEDSNP_SNP_CA_34267142_Lg11_02910_MAF10_1657398_exon1marker_locus34267142 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_AC_35859098_Lg11_00795_MAF40_MDP0000126702_exon6RosBREEDSNP_SNP_AC_35859098_Lg11_00795_MAF40_MDP0000126702_exon6marker_locus35859098 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_TG_35936616_Lg11_RosCOS372_MAF50_826662_exon1RosBREEDSNP_SNP_TG_35936616_Lg11_RosCOS372_MAF50_826662_exon1marker_locus35936616 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_CT_36886760_Lg11_141951_MAF20_141951_exon1RosBREEDSNP_SNP_CT_36886760_Lg11_141951_MAF20_141951_exon1marker_locus36886760 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_TG_37676795_Lg11_MDP0000258603_MAF20_MDP0000258603_exon18RosBREEDSNP_SNP_TG_37676795_Lg11_MDP0000258603_MAF20_MDP0000258603_exon18marker_locus37676795 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_CT_39147122_Lg11_00646_MAF50_MDP0000294661_exon1RosBREEDSNP_SNP_CT_39147122_Lg11_00646_MAF50_MDP0000294661_exon1marker_locus39147122 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18RosBREEDSNP_SNP_TC_39154409_Lg11_00646_MAF40_1638302_exon18marker_locus39154409 bp
Apple-M432-2013-physical-Malus-domestica.11RosBREEDSNP_SNP_GA_39168050_Lg11_00646_MAF50_389117_exon4RosBREEDSNP_SNP_GA_39168050_Lg11_00646_MAF50_389117_exon4marker_locus39168050 bp
Apple-M432-2013-physical-Malus-domestica.12snpCN899883snpCN899883marker_locus0 bp
Apple-M432-2013-physical-Malus-domestica.12RosBREEDSNP_SNP_TC_2113_Lg12_snpCN899883_MAF30_MDP0000470920_exon1RosBREEDSNP_SNP_TC_2113_Lg12_snpCN899883_MAF30_MDP0000470920_exon1marker_locus2113 bp
Apple-M432-2013-physical-Malus-domestica.12RosBREED_RosBREEDSNP_SNP_CT_31019_Lg12RosBREED_RosBREEDSNP_SNP_CT_31019_Lg12marker_locus31019 bp
Apple-M432-2013-physical-Malus-domestica.12RosBREEDSNP_SNP_GA_1190993_Lg12_RosCOS3293_MAF10_642737_exon1RosBREEDSNP_SNP_GA_1190993_Lg12_RosCOS3293_MAF10_642737_exon1marker_locus1190993 bp
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Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
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