Apple-M432-2013-physical-Malus-domestica

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NameApple-M432-2013-physical-Malus-domestica
SpeciesMalus x domestica
Map typephysical
Population typeF1
Commentsphysical locations of the markers in Malus x domestica genome assembly
Map unitbp
Maternal parentM.27
Paternal parentM.116
Number of loci750
Number of linkage groups17
Publication[view all]
ContactDaniel Sargent
Stock
NameTypeDetails
M.27_x_M.116population
Map Loci
This map contains 750 marker loci:
Download Table
Linkage GroupMarker NameLocus NameTypePosition
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_593291_Lg13_01917_MAF10_MDP0000697770_exon1RosBREEDSNP_SNP_TC_593291_Lg13_01917_MAF10_MDP0000697770_exon1marker_locus593291 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_AG_607115_Lg13_01579_MAF20_MDP0000269671_exon5RosBREEDSNP_SNP_AG_607115_Lg13_01579_MAF20_MDP0000269671_exon5marker_locus607115 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_GT_2161379_Lg13_00098_MAF40_MDP0000635134_exon1RosBREEDSNP_SNP_GT_2161379_Lg13_00098_MAF40_MDP0000635134_exon1marker_locus2161379 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_GA_2188843_Lg13_00098_MAF30_1687731_exon1RosBREEDSNP_SNP_GA_2188843_Lg13_00098_MAF30_1687731_exon1marker_locus2188843 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2RosBREEDSNP_SNP_CT_3825745_Lg13_00565_MAF10_613831_exon2marker_locus3825745 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_GA_6451264_Lg13_65890_MAF20_65890_exon1RosBREEDSNP_SNP_GA_6451264_Lg13_65890_MAF20_65890_exon1marker_locus6451264 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_CT_7170435_Lg13_00128_MAF30_1660285_exon4RosBREEDSNP_SNP_CT_7170435_Lg13_00128_MAF30_1660285_exon4marker_locus7170435 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_7514383_Lg13_AT4_MAF40_MDP0000279182_exon2RosBREEDSNP_SNP_TC_7514383_Lg13_AT4_MAF40_MDP0000279182_exon2marker_locus7514383 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_CA_8622383_Lg13_RosCOS2067_MAF30_1632184_exon1RosBREEDSNP_SNP_CA_8622383_Lg13_RosCOS2067_MAF30_1632184_exon1marker_locus8622383 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_8705446_Lg13_RosCOS2067_MAF10_MDP0000187392_exon5RosBREEDSNP_SNP_TC_8705446_Lg13_RosCOS2067_MAF10_MDP0000187392_exon5marker_locus8705446 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_9191531_Lg13_01742_MAF30_1632702_exon3RosBREEDSNP_SNP_TC_9191531_Lg13_01742_MAF30_1632702_exon3marker_locus9191531 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_GA_10657898_Lg13_00140_MAF30_1627277_exon5RosBREEDSNP_SNP_GA_10657898_Lg13_00140_MAF30_1627277_exon5marker_locus10657898 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_CT_10675958_Lg13_00140_MAF30_MDP0000264431_exon10RosBREEDSNP_SNP_CT_10675958_Lg13_00140_MAF30_MDP0000264431_exon10marker_locus10675958 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_GA_11693678_Lg13_RosCOS3400_MAF40_MDP0000170303_exon1RosBREEDSNP_SNP_GA_11693678_Lg13_RosCOS3400_MAF40_MDP0000170303_exon1marker_locus11693678 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_GA_12108562_Lg13_RosCOS3331_MAF20_1676265_exon1RosBREEDSNP_SNP_GA_12108562_Lg13_RosCOS3331_MAF20_1676265_exon1marker_locus12108562 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_17544043_Lg13_00390_MAF30_MDP0000427027_exon1RosBREEDSNP_SNP_TC_17544043_Lg13_00390_MAF30_MDP0000427027_exon1marker_locus17544043 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_CT_17558426_Lg13_00390_MAF20_220183_exon1RosBREEDSNP_SNP_CT_17558426_Lg13_00390_MAF20_220183_exon1marker_locus17558426 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_20185279_Lg13_00532_MAF50_MDP0000220963_exon2RosBREEDSNP_SNP_TC_20185279_Lg13_00532_MAF50_MDP0000220963_exon2marker_locus20185279 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_20351261_Lg13_02063_MAF30_1627812_exon2RosBREEDSNP_SNP_TC_20351261_Lg13_02063_MAF30_1627812_exon2marker_locus20351261 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_AG_21721114_Lg13_02069_MAF30_1664580_exon1RosBREEDSNP_SNP_AG_21721114_Lg13_02069_MAF30_1664580_exon1marker_locus21721114 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_GA_22644483_Lg13_RosCOS1496_MAF40_47204_exon1RosBREEDSNP_SNP_GA_22644483_Lg13_RosCOS1496_MAF40_47204_exon1marker_locus22644483 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1RosBREEDSNP_SNP_GA_25477462_Lg13_00164_MAF30_MDP0000728942_exon1marker_locus25477462 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_26252739_Lg13_02452_MAF30_MDP0000212353_exon6RosBREEDSNP_SNP_TC_26252739_Lg13_02452_MAF30_MDP0000212353_exon6marker_locus26252739 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_TC_26256422_Lg13_02452_MAF20_MDP0000212353_exon3RosBREEDSNP_SNP_TC_26256422_Lg13_02452_MAF20_MDP0000212353_exon3marker_locus26256422 bp
Apple-M432-2013-physical-Malus-domestica.13RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1RosBREEDSNP_SNP_AG_27018760_Lg13_MDP0000163961_MAF10_MDP0000163961_exon1marker_locus27018760 bp
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Contact
NameDetails
Daniel Sargent
First name:Daniel
Last name:Sargent
Title:researcher
Institution:East Malling Research (EMR)
Address:New Road, East Malling, Kent ME19 6BJ, UK
Country:Itlay
Email:dan.sargent@emr.ac.uk
Publication
YearPublications
2013Troggio M, Surbanovski N, Bianco L, Moretto M, Giongo L, Banchi E, Viola R, Fern√°ndez FF, Costa F, Velasco R, Cestaro A, Sargent DJ. Evaluation of SNP Data from the Malus Infinium Array Identifies Challenges for Genetic Analysis of Complex Genomes of Polyploid Origin. PloS one. 2013; 8(6):e67407.
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