Chilling requirement, qCRDynamicCxFG5.2009 (QTL) Prunus persica

QTL Overview
QTL LabelqCR.CxF-G5.2009
Published SymbolqCR7-2009
Trait Namechilling requirement
Trait AliasN/A
Trait StudyBloom date traits-Abbott-2010
PopulationContender_x_Fla.92-2C-F2
Female ParentBY01p6245
Male ParentBY01p6245
Colocalizing MarkerCPPCT033
Neighboring MarkerN/A
EnvironmentN/A
LOD25.46
Additivity Dominance RatioN/A
R226.3
CommentsR2 was calculated as Part R2, percentage of phenotypic variance explained by one QTL when other QTL effects are fixed.
Map Positions
#Map NameLinkage GroupBinChromosomePeakSpan StartSpan StopMapViewer
1Peach-CF-F2G7N/AN/A342438View
Alignments
Feature NameTypeLocationAnalysis
Pp07 chromosome Pp07:16300727..16301020. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
scaffold_7 supercontig scaffold_7:16702195..16702488. Prunus persica Whole Genome v1.0 Assembly & Annotation
Sequences
The following sequences are available for this feature:

QTL from alignment at Pp07:16300727..16301020

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qCR.CxF-G5.2009 ID=qCR.CxF-G5.2009; Name=chilling requirement; organism=Prunus persica; type=QTL; length=294bp; location=Sequence derived from: Pp07:16300727..16301020 (Prunus persica
TCAGCAAACTAGAAACAAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCAATGATGTTAGTTTCTCCAGCATCCACCTCCCTATTATCAAACC CACTTCAAAGCTTCCATGCCACATACAAAACAACATCAACCAGATTGCAA GCCCCAGCCAAGGTCTTAGCCATGGCAAAGCAAACCAGCGACGACAGCAG CAGCAGCACCATTGCAGAGAAAGCAGCCATAGCAGGAGGCCTAGTCTCCA CCCCAGTGATTGGCTGGTCACTCTACACCCTCAAAACAACCGGC
back to top

QTL from alignment at scaffold_7:16702195..16702488

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qCR.CxF-G5.2009 ID=qCR.CxF-G5.2009; Name=chilling requirement; organism=Prunus persica; type=QTL; length=294bp; location=Sequence derived from: scaffold_7:16702195..16702488 (Prunus persica
TCAGCAAACTAGAAACAAACCCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTCAATGATGTTAGTTTCTCCAGCATCCACCTCCCTATTATCAAACC CACTTCAAAGCTTCCATGCCACATACAAAACAACATCAACCAGATTGCAA GCCCCAGCCAAGGTCTTAGCCATGGCAAAGCAAACCAGCGACGACAGCAG CAGCAGCACCATTGCAGAGAAAGCAGCCATAGCAGGAGGCCTAGTCTCCA CCCCAGTGATTGGCTGGTCACTCTACACCCTCAAAACAACCGGC
back to top