Fruit skin color, qSKC.EN-ch6 (QTL) Prunus avium

QTL Overview
QTL LabelqFSC.EN-ch6
Published SymbolSkc
Trait Nameskin color
Trait AliasN/A
Trait StudySweet Cherry-Fruit Skin and Flesh Color-Iezzoni-2010
PopulationEmperor_Francis_x_ New_York 54
Female ParentEmperor_Francis
Male ParentNew_York 54
Colocalizing MarkerN/A
Neighboring MarkerEPPB4227
EnvironmentN/A
LOD4
Additivity Dominance RatioN/A
R2N/A
CommentsN/A
Map Positions
#Map NameLinkage GroupBinChromosomePeakSpan StartSpan StopMapViewer
1Sweet Cherry-EFxNY-F1G6N/AN/A64--View
Alignments
Feature NameTypeLocationAnalysis
Pp06 chromosome Pp06:23935476..23937228. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
scaffold_6 supercontig scaffold_6:22071308..22073060. Prunus persica Whole Genome v1.0 Assembly & Annotation
Sequences
The following sequences are available for this feature:

QTL from alignment at Pp06:23935476..23937228

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qFSC.EN-ch6 ID=qFSC.EN-ch6; Name=skin color; organism=Prunus avium; type=QTL; length=1753bp; location=Sequence derived from: Pp06:23935476..23937228 (Prunus persica
ACTGGAGGTGTGACGTGGCCGAGGTAAATTATTGATGGATTATGCGGTTA ACGCGGTTTGCTTGTAGCTACAAACGACTCTGAGACAGAAAGAAACCTCG TTTTCTCCCCCTTTCATTTCTCTGGATCCAATTTTAGGGTTTCAAAATTC AATCCCTCTCTCTCTCTCTCTCTCTGCGATTCAAATTTTAGGGTTTCTGA TTTCTCTCTGCGATCAATTATGGCGATCAACAACAGGGAGAGCAACGTCC AAGAGGAATCGAACCCTCTTCTGAGCCAGCAATTCGAGGAGCCTCAGAAG GATGCTGAAAAGCCCGCCAAGGCCTCGCCGGAGACTCAGTCGCCGGAGAA ATCTCAGGCAGAGATGGGCCATGTGAATGGCGGTGGTAATGGCTGCGGGT GGACCGCCGATGGGCTGCCGTTGGGGCACGGGAGCGTGATGGGTGAGCCC ATGGGCCGGGCCCAGTGGGACTCCGGCCTTCTTGCATGTCTCGGCCGTAA TGATGATTTCTGTAGCAGCGATCTTGAAGTTTGTAAGTTTTTTCATTCTG ATTTTCTTTTTCGGTTAAGTTTTCTTTTTGATTTTTCAATTAAGATTTTG GCATCATGCGATGTTTGAATTTCAATGTTCTATTGTGCCCTCAGTAGCTC TGATTCATTGGATTTTAGGTGACTGATTATTTAATTGCCTTTGGGCATTT GAAATGGTGTAAAATTAGCTCGATCGTGGCATTGAATAGAACTATAACAT GTGTTTTATTTATAACAATTCCTCTCAATTTTACAGGATGCAAAATCGAT TAATCTTGACTCTGTATTTCTATATTGTTTGGAATAGATGTATTATGTTA TTATATAATACTTGTACGGTTTACGCTGCTGTGCCTTTAATCATTAATAC AAAAGAAAAAGGGGGGTATTACACATTTTCTGGAATAATTATGCATCTTG TTGATTACTATACTGACCCAAGGGGTAGGGTGAACCACCCAATACCCAAA ACGTGTTTTTAGATGTACCATTCTGCAATTTGGTATACGTTATTAATTGG ATTGGATCACAATTGGCAATAGCTTTTTGAATATATAACGATTTACCCAA CACAGGGTTCTGGATGATTTTTCATTCATCATATGCCTGTCCCTGTTGTC TTTTGAGTTTCTGTAAGGCATAGTCTTGAGAAGTGTCTTTTATTTTCTTT TGGTACTTCCCCTTCTTTTATAAATGTATGGTTTGCCTCGCGAAAAATTC GAAAGAAAATATCGAGTCATCAACAAAAACGGAAAGAGAGGGATTCGAAC CCTCGGTACGAAAAACTCCACTTAGCATTTTATCAAAACTCAAATTCATA TTATCCCTAAATTTCGGAAAACATGAGTGGTTAAAAACAAGACTGTTTGT TCATTCAGCTTTTGCTTTAGTGGAATTTCTAACTTTTTTTCCCACTGGAA AATATGACAATTATGTACCCGCATGAAATAGTTTGGATAAATTGTTGGTT AATACTTGAAAATCAGGTCTTCTGGATTATAAGATTGTATTTCTTTATGG ATATGTTTTGTCAGTGTTCTTTCCTACATGTTATCGACATTTGTCATACT AACGTTGATGTGATCTGGCTAGGCCTTCTTGGAAGTGTGGCTCCTTGTGT GTTGTATGGAAGCAATGTTGAGAGACTTGGATCTACTCCTGGGACGTTTG CAAATCACTGTTTGTCTTACTATGGTCTATATCTGATTGGTAATACCTTT TTT
back to top

QTL from alignment at scaffold_6:22071308..22073060

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qFSC.EN-ch6 ID=qFSC.EN-ch6; Name=skin color; organism=Prunus avium; type=QTL; length=1753bp; location=Sequence derived from: scaffold_6:22071308..22073060 (Prunus persica
ACTGGAGGTGTGACGTGGCCGAGGTAAATTATTGATGGATTATGCGGTTA ACGCGGTTTGCTTGTAGCTACAAACGACTCTGAGACAGAAAGAAACCTCG TTTTCTCCCCCTTTCATTTCTCTGGATCCAATTTTAGGGTTTCAAAATTC AATCCCTCTCTCTCTCTCTCTCTCTGCGATTCAAATTTTAGGGTTTCTGA TTTCTCTCTGCGATCAATTATGGCGATCAACAACAGGGAGAGCAACGTCC AAGAGGAATCGAACCCTCTTCTGAGCCAGCAATTCGAGGAGCCTCAGAAG GATGCTGAAAAGCCCGCCAAGGCCTCGCCGGAGACTCAGTCGCCGGAGAA ATCTCAGGCAGAGATGGGCCATGTGAATGGCGGTGGTAATGGCTGCGGGT GGACCGCCGATGGGCTGCCGTTGGGGCACGGGAGCGTGATGGGTGAGCCC ATGGGCCGGGCCCAGTGGGACTCCGGCCTTCTTGCATGTCTCGGCCGTAA TGATGATTTCTGTAGCAGCGATCTTGAAGTTTGTAAGTTTTTTCATTCTG ATTTTCTTTTTCGGTTAAGTTTTCTTTTTGATTTTTCAATTAAGATTTTG GCATCATGCGATGTTTGAATTTCAATGTTCTATTGTGCCCTCAGTAGCTC TGATTCATTGGATTTTAGGTGACTGATTATTTAATTGCCTTTGGGCATTT GAAATGGTGTAAAATTAGCTCGATCGTGGCATTGAATAGAACTATAACAT GTGTTTTATTTATAACAATTCCTCTCAATTTTACAGGATGCAAAATCGAT TAATCTTGACTCTGTATTTCTATATTGTTTGGAATAGATGTATTATGTTA TTATATAATACTTGTACGGTTTACGCTGCTGTGCCTTTAATCATTAATAC AAAAGAAAAAGGGGGGTATTACACATTTTCTGGAATAATTATGCATCTTG TTGATTACTATACTGACCCAAGGGGTAGGGTGAACCACCCAATACCCAAA ACGTGTTTTTAGATGTACCATTCTGCAATTTGGTATACGTTATTAATTGG ATTGGATCACAATTGGCAATAGCTTTTTGAATATATAACGATTTACCCAA CACAGGGTTCTGGATGATTTTTCATTCATCATATGCCTGTCCCTGTTGTC TTTTGAGTTTCTGTAAGGCATAGTCTTGAGAAGTGTCTTTTATTTTCTTT TGGTACTTCCCCTTCTTTTATAAATGTATGGTTTGCCTCGCGAAAAATTC GAAAGAAAATATCGAGTCATCAACAAAAACGGAAAGAGAGGGATTCGAAC CCTCGGTACGAAAAACTCCACTTAGCATTTTATCAAAACTCAAATTCATA TTATCCCTAAATTTCGGAAAACATGAGTGGTTAAAAACAAGACTGTTTGT TCATTCAGCTTTTGCTTTAGTGGAATTTCTAACTTTTTTTCCCACTGGAA AATATGACAATTATGTACCCGCATGAAATAGTTTGGATAAATTGTTGGTT AATACTTGAAAATCAGGTCTTCTGGATTATAAGATTGTATTTCTTTATGG ATATGTTTTGTCAGTGTTCTTTCCTACATGTTATCGACATTTGTCATACT AACGTTGATGTGATCTGGCTAGGCCTTCTTGGAAGTGTGGCTCCTTGTGT GTTGTATGGAAGCAATGTTGAGAGACTTGGATCTACTCCTGGGACGTTTG CAAATCACTGTTTGTCTTACTATGGTCTATATCTGATTGGTAATACCTTT TTT
back to top