Hi07b02, Hi07b02 (genetic_marker) Malus x domestica

Marker Overview
NameHi07b02
Genbank IDN/A
TypeSSR
SpeciesMalus x domestica
Repeat MotifGT
PCR Conditionannealing temp 60 degree
Primer 1Hi07b02.primer 1: ATTTGGGGTTTCAACAATGG
Primer 2Hi07b02.primer 2: GTTTCGGACATCAAACAAATGTGC
Product Length212-218
PolymorphismP_ Hi07b02
Publication[view all]
ContactA. Patocchi
Andreas Peil
Felicidad Fernandez-Fernandez
Contact
NameDetails
A. Patocchi
First name:Andrea
Last name:Patocchi
Institution:Agroscope Changins-W?denswil Research Station ACW
Address:Standort W?denswil Schloss Postfach 185 8820 W?denswil
Country:SWITZERLAND
Email:andrea.patocchi@acw.admin.ch
Phone:+41 44 783 6313
Fax:+41 (0)44 783 63 05
Andreas Peil
First name:Andreas
Last name:Peil
Title:Researcher
Institution:Institute for Breeding Research on Fruit
Address:Kulius Kuhn-Institut (JKI), Pillnitzer Platz 3a, 01326
Country:Dresden, Germany
Email:andreas.peil@jki.bund.de
Felicidad Fernandez-Fernandez
First name:Felicidad
Last name:Fernandez-Fernandez
Title:Researcher
Institution:East Malling Research
Address:East Malling Research (EMR), New Road, East Malling, Kent ME19 6BJ, UK
Country:United Kingdoms
Email:felicidad.fernandez@emr.ac.uk
Fax:+44 1732 849067
Last update:Mar 2006
Publications
YearPublication
2010Velasco R, Zharkikh A, Affourtit J, Dhingra A, Cestaro A, Kalyanaraman A, Fontana P, Bhatnagar SK, Troggio M, Pruss D, Salvi S, Pindo M, Baldi P, Castelletti S, Cavaiuolo M, Coppola G, Costa F, Cova V, Dal Ri A, Goremykin V, Komjanc M, Longhi S, Magnago P, Malacarne G, Malnoy M, Micheletti D, Moretto M, Perazzolli M, Si-Ammour A, Vezzulli S, Zini E, Eldredge G, Fitzgerald LM, Gutin N, Lanchbury J, Macalma T, Mitchell JT, Reid J, Wardell B, Kodira C, Chen Z, Desany B, Niazi F, Palmer M, Koepke T, Jiwan D, Schaeffer S, Krishnan V, Wu C, Chu VT, King ST, Vick J, Tao Q, Mraz A, Stormo A, Stormo K, Bogden R, Ederle D, Stella A, Vecchietti A, Kater MM, Masiero S, Lasserre P, Lespinasse Y, Allan AC, Bus V, Chagné D, Crowhurst RN, Gleave AP, Lavezzo E, Fawcett JA, Proost S, Rouzé P, Sterck L, Toppo S, Lazzari B, Hellens RP, Durel CE, Gutin A, Bumgarner RE, Gardiner SE, Skolnick M, Egholm M, Van de Peer Y, Salamini F, Viola R. The genome of the domesticated apple (Malus x domestica Borkh.). Nature Genetics. 2010 Oct; 42(10):833-839.
2006Silfverberg-Dilworth E, Matasci CL, Van de Weg WE, Van Kaauwen MPW, Walser M, Kodde LP, Soglio V, Gianfranceschi L, Durel CE, Costa F, Yamamoto T, Koller B, Gessler C Patocchi A. Microsatellite markers spanning the apple (Malus x domestica Borkh.) genome. Tree Genetics and Genomes. 2006; 2(4):202-224.
2014Wöhner TW, Flachowsky H, Richter K, Garcia-Libreros T, Trognitz F, Hanke M, Peil A. QTL mapping of fire blight resistance in Malus ×robusta 5 after inoculation with different strains of Erwinia amylovora. Molecular breeding. 2014; 34(1):217-230.
2012Antanaviciute L, Fernández-Fernández F, Jansen J, Banchi E, Evans KM, Viola R, Velasco R, Dunwell JM, Troggio M, Sargent DJ. Development of a dense SNP-based linkage map of an apple rootstock progeny using the Malus Infinium whole genome genotyping array. BMC genomics. 2012; 13:203.
2012Fernández-Fernández F, Antanaviciute L, van Dyk MM, Tobutt KR, Evans KM, Rees DJG, Dunwell JM, Sargent DJ. A genetic linkage map of an apple rootstock progeny anchored to the Malus genome sequence. Tree genetics & genomes. 2012; 8(5):991-1002.
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple Integrated map4N/A38.1Hi07b02View
2Apple-IM-F1-IdaredIda LG 4N/A30.1Hi07b02View
3Apple-JM7xS63-F1J13N/A29.8Hi07b02View
4Apple-MM-F113N/A24.1Hi07b02.yView
5Apple-M432-2012LG13N/A8.4Hi07b02.yView
6Apple-M27xM116-2016LG13N/A21.4Hi07b02.yView
7Apple-M432-2012LG4N/A44.6Hi07b02.zView
8Apple-JM7xS63-F1J4N/A61Hi07b02View
9Apple-JM7xS63-F1S7N/A45.9Hi07b02View
10Apple-JM7xS63-F1J13N/A29.8Hi07b02View
11Apple-JM7xS63-F1S13N/A26.4Hi07b02View
12Apple-JM7xS63-F1S17N/A31.7Hi07b02View