s1_32211995, s1_32211995 (genetic_marker) Prunus avium

Marker Overview
Names1_32211995
dbSNP IDN/A
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGAAGGCCAACATCCGCTAGGTTGCTGAAAAACGCAACAATTGCAGCTTGCGAAAATGTTG CGCTGAAAATTAATTTGGGAGTACGCAATTACTGGAATTGCAAAATTCGCAGGCAAGGGA ATATTTGATGATACTGCGGAGGGCAGCCCT
3' Flanking SequenceAGCAGGAAATGAACTGACCTAGTTTTCAACAAGGAGATTAAATCATGTAATGAAGGCAAT GTTTTGGCTGGCTGCAATATTTGAGCCCTTGAACTTTCATCTGAGTCTGCAATTTTTGGT TTTTCATCTGAGAGTAATGGAGCAGAAAGT
SpeciesPrunus avium
Publication[view all]
ContactPatricio Hinrichsen
Stijn Vanderzande
Commentsweet cherry SNPs identified by GBS from Guajardo et al (2015), genetically mapped
Contact
NameDetails
Patricio Hinrichsen
First name:Patricio
Last name:Hinrichsen
Title:Investigator, R&D SubDirector
Institution:Instituto de Investigaciones Agropecuarias (INIA) La Platina
Address:Santa Rosa 11610, La Pintana
Country:Chile
Email:phinrichsen@inia.cl
Phone:56 2 25779101
Fax:56 2 25779104
Keywords:Plant genetics and breeding
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-Ri-F1RiLG1N/A74.57s1_32211995View
2Sweet Cherry-RaxRi-F1LG1N/A83.41s1_32211995View
3Sweet_cherry_RaxRi_F1-physical-Prunus-persicaV1.0scaffold 1N/A32211995s1_32211995View
Sequence
>s1_32211995 ID=s1_32211995; Name=s1_32211995; organism=Prunus avium; type=genetic_marker; length=301bp
GAAGGCCAACATCCGCTAGGTTGCTGAAAAACGCAACAATTGCAGCTTGC
GAAAATGTTGCGCTGAAAATTAATTTGGGAGTACGCAATTACTGGAATTG
CAAAATTCGCAGGCAAGGGAATATTTGATGATACTGCGGAGGGCAGCCCT
YAGCAGGAAATGAACTGACCTAGTTTTCAACAAGGAGATTAAATCATGTA
ATGAAGGCAATGTTTTGGCTGGCTGCAATATTTGAGCCCTTGAACTTTCA
TCTGAGTCTGCAATTTTTGGTTTTTCATCTGAGAGTAATGGAGCAGAAAG
T
Alignments
Feature NameTypeLocationAnalysis
Pp01 chromosome Pp01:33185796..33185796. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)