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Marker Overview
Name | s5_15384775 |
dbSNP ID | N/A |
SNP Array ID | Cherry 6+9K SNP array: | s5_15384775 |
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Type | SNP |
SNP Alleles | A/G |
5' Flanking Sequence | TGTGTTCCCAAGGCGCCTATCAGATTGCAGAGCTTGGAAGACTGTATAAGTTTGCTGCTG
GACCATAGCAACATAGTATATAATGGTTGAGATCCAAATGGGAACCACTCTCAACAAGCA
CTTCACTTGTTCCACTTCCTGCAGGCTGCA |
3' Flanking Sequence | AGCTTCCATGGAGTTGCTGTTGATCCATCTAAGTTGATTTTGTCTTCATTGGTAATTATT
GCAGCTTTGTCTAGGATTCTGAAAACAGAGGTAAATTTTGGTTAGTCAAGCAGTAATATC
TCAAAATTGGGACATGTCAACCACCAAATT |
Species | Prunus avium |
Publication | [view all] |
Contact | Patricio Hinrichsen Stijn Vanderzande
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Comment | sweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intergenic SNPs |
Publications
Year | Publication |
2015 | Guajardo V, Solís S, Sagredo B, Gainza F, Muñoz C, Gasic K, Hinrichsen P. Construction of high density sweet cherry (Prunus avium L.) linkage maps using microsatellite markers and SNPs detected by genotyping-by-sequencing (GBS). PLoS ONE 2015. |
2020 | Vanderzande S, Zheng P, Cai L, Barac G, Gasic K, Main D, Iezzoni A and Peace C. The cherry 6+9K SNP array: a cost-effective improvement to the cherry 6K SNP array for genetic studies. Scientific Reports 10, 7613 (2020). https://doi.org/10.1038/s41598-020-64438-x |
Sequence
>s5_15384775 ID=s5_15384775; Name=s5_15384775; organism=Prunus avium; type=genetic_marker; length=301bp TGTGTTCCCAAGGCGCCTATCAGATTGCAGAGCTTGGAAGACTGTATAAG TTTGCTGCTGGACCATAGCAACATAGTATATAATGGTTGAGATCCAAATG GGAACCACTCTCAACAAGCACTTCACTTGTTCCACTTCCTGCAGGCTGCA RAGCTTCCATGGAGTTGCTGTTGATCCATCTAAGTTGATTTTGTCTTCAT TGGTAATTATTGCAGCTTTGTCTAGGATTCTGAAAACAGAGGTAAATTTT GGTTAGTCAAGCAGTAATATCTCAAAATTGGGACATGTCAACCACCAAAT T
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