s6_26407153, s6_26407153 (genetic_marker) Prunus avium

Marker Overview
Names6_26407153
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:s6_26407153
TypeSNP
SNP AllelesT/G
5' Flanking SequenceGGGCCAGGT
3' Flanking SequenceCTTTGCTATCCGGGCGGGTCAAATGGCCCGGTTACCATATTATCAAGGGTGCTG
SpeciesPrunus avium
Publication[view all]
ContactPatricio Hinrichsen
Stijn Vanderzande
Commentsweet cherry SNPs identified by GBS from Guajardo et al (2015), genetically mapped
Contact
NameDetails
Patricio Hinrichsen
First name:Patricio
Last name:Hinrichsen
Title:Investigator, R&D SubDirector
Institution:Instituto de Investigaciones Agropecuarias (INIA) La Platina
Address:Santa Rosa 11610, La Pintana
Country:Chile
Email:phinrichsen@inia.cl
Phone:56 2 25779101
Fax:56 2 25779104
Keywords:Plant genetics and breeding
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-Ra-F1RaLG6N/A72.94s6_26407153View
2Sweet Cherry-RaxRi-F1LG6N/A89.94s6_26407153View
3Sweet_cherry_RaxRi_F1-physical-Prunus-persicaV1.0scaffold 6N/A26407153s6_26407153View
4Sweet Cherry-RosBREED-3.8K-20206N/A99.12s6_26407153View
5Sweet Cherry-V-F1-6+9K_array6N/A94.16s6_26407153View
6Sweet Cherry-VxC-F1-6+9K_array6N/A103.15s6_26407153View
Sequence
>s6_26407153 ID=s6_26407153; Name=s6_26407153; organism=Prunus avium; type=genetic_marker; length=64bp
GGGCCAGGTKCTTTGCTATCCGGGCGGGTCAAATGGCCCGGTTACCATAT
TATCAAGGGTGCTG
Alignments
Feature NameTypeLocationAnalysis
Pp06 chromosome Pp06:28271770..28271770. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)