s8_17694886, s8_17694886 (genetic_marker) Prunus avium

Marker Overview
Names8_17694886
dbSNP IDN/A
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTTAGCTGGATCACTCTCCGCTGGTGAAATGGGAGGCTTATCATTTGATGTGGGTTCACCT GATTCTAATGGTTGTTGCTCACTAGAAGGTGCTGGTGTGGTAGTATGGGCTGCTTCTAAT AGCAAGGGCTTGCCTGGTTGCTGCTGTGAG
3' Flanking SequenceTCTGAGCCCCAGGAGCTGGTTTCTTTTGAACAGAAATTGGAGGAGCTGAAAGAGACGGCA TCCCTGGCGGAAGAATTTCAATCGGCGGCTTCTTGGCAGCATCTGCTAAACTTGTGAGCT TTGGTTCCTCCAGAGAAGCCAAAAATGCAG
SpeciesPrunus avium
Publication[view all]
ContactPatricio Hinrichsen
Stijn Vanderzande
Commentsweet cherry SNPs identified by GBS from Guajardo et al (2015), unmapped - intergenic SNPs
Contact
NameDetails
Patricio Hinrichsen
First name:Patricio
Last name:Hinrichsen
Title:Investigator, R&D SubDirector
Institution:Instituto de Investigaciones Agropecuarias (INIA) La Platina
Address:Santa Rosa 11610, La Pintana
Country:Chile
Email:phinrichsen@inia.cl
Phone:56 2 25779101
Fax:56 2 25779104
Keywords:Plant genetics and breeding
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-Ri-F1RiLG8N/A26.3s8_17694886View
2Sweet_cherry_RaxRi_F1-physical-Prunus-persicaV1.0scaffold 8N/A17694886s8_17694886View
Sequence
>s8_17694886 ID=s8_17694886; Name=s8_17694886; organism=Prunus avium; type=genetic_marker; length=301bp
TTAGCTGGATCACTCTCCGCTGGTGAAATGGGAGGCTTATCATTTGATGT
GGGTTCACCTGATTCTAATGGTTGTTGCTCACTAGAAGGTGCTGGTGTGG
TAGTATGGGCTGCTTCTAATAGCAAGGGCTTGCCTGGTTGCTGCTGTGAG
KTCTGAGCCCCAGGAGCTGGTTTCTTTTGAACAGAAATTGGAGGAGCTGA
AAGAGACGGCATCCCTGGCGGAAGAATTTCAATCGGCGGCTTCTTGGCAG
CATCTGCTAAACTTGTGAGCTTTGGTTCCTCCAGAGAAGCCAAAAATGCA
G
Alignments
Feature NameTypeLocationAnalysis
Pp08 chromosome Pp08:18439336..18439336. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)