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Marker Overview
| Name | MDP0000194772 |
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| dbSNP ID | . |
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| SNP Array ID | | 480K SNP array for apple: | AX-115182122 | | 20K SNP array for apple: | MDP0000194772 |
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| Type | SNP |
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| SNP Alleles | T/C |
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| Probe 1 | MDP0000194772.probe: TAATACCATGATTTGCTTCAACATGGTTGAGGCTTCTCGGATCAATGATG |
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| 5' Flanking Sequence | CATTCAGTCCAACCATTCCGTCATCTTTTATAATAATACCATGATTTGCTTCAACATGGT
TGAGGCTTCTCGGATCAATGATG |
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| 3' Flanking Sequence | GAAGAGGTTTTTCTATGCTTCAAGTGCTTGTATTTATCCTGAATTTAAGCAGCTGGAAAC
CAATGTGAGCCTGAAGGAGTCTG |
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| Species | Malus x domestica |
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| Publication | [view all] |
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| Contact | Michela Troggio
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Publications
| Year | Publication |
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| 2014 | Bianco L, Cestaro A, Sargent DJ, Banchi E, Derdak S, Di Guardo M, Salvi S, Jansen J, Viola R, Gut I, Laurens F, Chagné D, Velasco R, van de Weg E, Troggio M. Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh). PloS one. 2014; 9(10):e110377. |
| 2016 | Bianco L, Cestaro A, Linsmith G, Muranty H, Denance C, Théron A, Poncet C, Micheletti D, Kerschbamer E, Di Pierro EA, Larger S, Pindo M, van de Weg E, Davassi A, Laurens F, Velasco R, Durel CE, Troggio M. Development and validation of the Axiom(®) Apple480K SNP genotyping array. The Plant journal : for cell and molecular biology. 2016 Feb 26. |
Sequence
>MDP0000194772 ID=MDP0000194772; Name=MDP0000194772; organism=Malus x domestica; type=genetic_marker; length=75bp
CTTCAACATGGTTGAGGCTTCTCGGATCAATGATG[C/T]GAAGAGGTTT
TTCTATGCTTCAAGTGCTTGTATTT
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