Vm_DCA3_WRKY, Vm_DCA3_WRKY (genetic_marker) Malus x domestica

Marker Overview
NameVm_DCA3_WRKY
dbSNP ID.
SNP Array ID
480K SNP array for apple:AX-115182998
20K SNP array for apple:Vm_DCA3_WRKY
TypeSNP
SNP AllelesA/G
Probe 1Vm_DCA3_WRKY.probe: CCTGCCTTCATTAGCTTCCACAATGGGAGGAAAAGATCAGTTATCTACTG
5' Flanking SequenceATCAGTGTGTTCTTCGTTCACTGCCTCGCTTGATTCCGACGATATCGATGAAGAGTTTGG YGTTGYAGGCTGCTGATTCAAAGAGGAGTAG
3' Flanking SequenceCAGTAGATAACTGATCTTTTCCTCCCATTGTGGAAGCTAATGAAGGCAGGGCTGTCGATG GTGTCTGAGGCAGATAATCAAA
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Libraries
Library NameType
20K SNP array for appleSNP_chip
480K SNP array for appleSNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-consensus-Allard-2016LG17N/A80.08Vm_DCA3_WRKYView
Sequence
>Vm_DCA3_WRKY ID=Vm_DCA3_WRKY; Name=Vm_DCA3_WRKY; organism=Malus x domestica; type=genetic_marker; length=65bp
AGGCTGCTGATTCAAAGAGGAGTAG[C/T]CAGTAGATAACTGATCTTTT
CCTCCCATTGTGGAA
Alignments
Feature NameTypeLocationAnalysis
Chr17 chromosome Chr17:33812488..33812488+ Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation