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Marker Overview
Name | Vm_DCA3_WRKY |
dbSNP ID | . |
SNP Array ID | 480K SNP array for apple: | AX-115182998 | 20K SNP array for apple: | Vm_DCA3_WRKY |
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Type | SNP |
SNP Alleles | A/G |
Probe 1 | Vm_DCA3_WRKY.probe: CCTGCCTTCATTAGCTTCCACAATGGGAGGAAAAGATCAGTTATCTACTG |
5' Flanking Sequence | ATCAGTGTGTTCTTCGTTCACTGCCTCGCTTGATTCCGACGATATCGATGAAGAGTTTGG
YGTTGYAGGCTGCTGATTCAAAGAGGAGTAG |
3' Flanking Sequence | CAGTAGATAACTGATCTTTTCCTCCCATTGTGGAAGCTAATGAAGGCAGGGCTGTCGATG
GTGTCTGAGGCAGATAATCAAA |
Species | Malus x domestica |
Publication | [view all] |
Contact | Michela Troggio
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Publications
Year | Publication |
2014 | Bianco L, Cestaro A, Sargent DJ, Banchi E, Derdak S, Di Guardo M, Salvi S, Jansen J, Viola R, Gut I, Laurens F, Chagné D, Velasco R, van de Weg E, Troggio M. Development and Validation of a 20K Single Nucleotide Polymorphism (SNP) Whole Genome Genotyping Array for Apple (Malus × domestica Borkh). PloS one. 2014; 9(10):e110377. |
2016 | Bianco L, Cestaro A, Linsmith G, Muranty H, Denance C, Théron A, Poncet C, Micheletti D, Kerschbamer E, Di Pierro EA, Larger S, Pindo M, van de Weg E, Davassi A, Laurens F, Velasco R, Durel CE, Troggio M. Development and validation of the Axiom(®) Apple480K SNP genotyping array. The Plant journal : for cell and molecular biology. 2016 Feb 26. |
Sequence
>Vm_DCA3_WRKY ID=Vm_DCA3_WRKY; Name=Vm_DCA3_WRKY; organism=Malus x domestica; type=genetic_marker; length=65bp AGGCTGCTGATTCAAAGAGGAGTAG[C/T]CAGTAGATAACTGATCTTTT CCTCCCATTGTGGAA
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