SNP_FB_0406117, SNP_FB_0406117 (genetic_marker) Malus x domestica

Marker Overview
NameSNP_FB_0406117
dbSNP ID.
SNP Array ID
480K SNP array for apple:AX-115191986
20K SNP array for apple:SNP_FB_0406117
TypeSNP
SNP AllelesT/C
Probe 1SNP_FB_0406117.probe: GGTTACGATGTCTTTTGTCACACATTTTAACATCTAATTTGTAAGACCCA
5' Flanking SequenceGGATGATMTATGAATAATGTACTAAAATAGAAAATTCAGATANTTGAAATNCATTATAAA
3' Flanking SequenceTGGGTCTTACAAATTAGATGTTAAAATGTGTGACAAAAGACATCGTAACCATATATATAA
SpeciesMalus x domestica
Publication[view all]
ContactMichela Troggio
Contact
NameDetails
Michela Troggio
First name:Michela
Last name:Troggio
Title:Researcher
Institution:Research and Innovation Centre, Fondazione Edmund Mach
Address:Via Edmund Mach, 1, 38010 San Michele All'adige TN, Italy
Country:Italy
Email:ti.hcamf@oiggort.alehcim
Phone:+39 0461 615111
Fax:+39 0461 650218
Libraries
Library NameType
20K SNP array for appleSNP_chip
480K SNP array for appleSNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-RGTxGD-F1-2015GD_17N/A78.65SNP_FB_0406117View
2Apple-consensus-Allard-2016LG17N/A75.01SNP_FB_0406117View
Sequence
>SNP_FB_0406117 ID=SNP_FB_0406117; Name=SNP_FB_0406117; organism=Malus x domestica; type=genetic_marker; length=49bp
CATTATAAA[A/G]TGGGTCTTACAAATTAGATGTTAAAATGTGTGACA
Alignments
Feature NameTypeLocationAnalysis
Chr17 chromosome Chr17:32330448..32330448- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation