NZmsAB052994, NZmsAB052994 (genetic_marker) Malus x domestica | GDR

Marker Overview

Marker Overview


Name	NZmsAB052994
Genbank ID	N/A
Type	SSR
Species	Malus x domestica
Repeat Motif	(CT)17
Primer 1	NZmsAB052994.F: TGCTATTAGCTCCTCCTGAATTG
Primer 2	NZmsAB052994.R: TTGTTGTTGCAGTGAAGGAA
Publication	[view all]
Contact	Miyuki Kunihisa S. Gardiner

Contact

Name

Details

Miyuki Kunihisa

First name:	Miyuki
Last name:	Kunihisa
Institution:	NARO Institute of Fruit Tree Science
Address:	2-1 Fujimoto, Tsukuba, Ibaraki 305-8605
Country:	Japan
Email:	miyuky@affrc.go.jp
Phone:	81-29-838-6437
Keywords:	fruit drop

S. Gardiner

First name:	Sue
Last name:	Gardiner
Institution:	HortResearch, New Zealand
Address:	HortResearch Palmerston North Tennent Drive Private Bag 11 030 Palmerston North, New Zealand
Email:	sgardiner@hortresearch.co.nz
Phone:	64-6-356 8080

Publications


Year	Publication
2014	Kunihisa M, Moriya S, Abe K, Okada K, Haji T, Hayashi T, Kim H, Nishitani C, Terakami S, Yamamoto T. Identification of QTLs for fruit quality traits in Japanese apples: QTLs for early ripening are tightly related to preharvest fruit drop. Breeding science. 2014 Sep; 64(3):240-51.
2009	Celton J-M, Tustin DS, Chagne D, Gardiner SE. Construction of a dense genetic linkage map for apple rootstocks using SSRs developed from Malus ESTs and Pyrus genomic sequences. Tree Genetics and Genomes. 2009; 5(1):93-107.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-OA-F1-Orin	OR12	N/A	0.7	NZmsAB052994	View
2	Apple-OA-F1-Akane	AK12	N/A	4.4	NZmsAB052994	View
3	Apple-GDxJ-F1-2012	LG12	N/A	18.4	NZmsAB052994	View
4	Apple-JGD-F1-2014	J12	N/A	2.6	NZmsAB052994	View
5	Pear-Ba-F1-2013	Ba12	N/A	1.6	NZmsAB052994	View
6	Pear-integrated_consensus_map-IPCG-2017	LG12	N/A	80.34	NZmsAB052994	View

Alignments

Feature Name	Type	Location	Analysis
chr12A	chromosome	chr12A:2585645..2585812.	Malus x domestica ‘Honeycrisp’ Genome v1.1.a1 Assembly & Annotation