PavCLF, PavCLF (genetic_marker) Prunus avium

Marker Overview
NameCLF
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:CLF
TypeSNP
SNP AllelesA/G
5' Flanking SequenceAAGAAAAATATTGTCAGGCTGAGAAACAACCTCCTTGGAGCTCTCCAGAT
3' Flanking SequenceCCGAAAATGCATCATGTGGTCCAAATTGCTATCGATCAGTACGTGTGTTG
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [A/G] 'Lapins' [A/G] 'Garnet' [G/G]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R7N/A26.73CLFView
2Sweet Cherry-RL-F1-2015R7N/A30.04CLFView
3Sweet Cherry-RL-F1-2015L7N/A40.85CLFView
4Sweet Cherry-RosBREED-3.8K-20207N/A36.27CLFView
Sequence
>CLF ID=CLF; Name=CLF; organism=Prunus avium; type=genetic_marker; length=101bp
AAGAAAAATATTGTCAGGCTGAGAAACAACCTCCTTGGAGCTCTCCAGAT
RCCGAAAATGCATCATGTGGTCCAAATTGCTATCGATCAGTACGTGTGTT
G
Alignments
Feature NameTypeLocationAnalysis
Pp07 chromosome Pp07:15025492..15025492. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr7 chromosome PAV_r1.0chr7:11797490..11797490. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)