PavDDF1, PavDDF1 (genetic_marker) Prunus avium

Marker Overview
NameDDF1
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:DDF1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceGCGAGCTGGGAGGAGGGTTTTCAAGGAGACCAGGCACCCTGTTTATAGGG
3' Flanking SequenceCGTGAGGAGGAGGAACAATGACAAGTGGGTGTGTGAAATGAGAGAGCCCA
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [A/G] 'Lapins' [G/G] 'Garnet' [G/G]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R5N/A26.61DDF1View
2Sweet Cherry-RL-F1-2015R5N/A18.9DDF1View
3Sweet Cherry-RosBREED-3.8K-20205N/A21.34DDF1View
Sequence
>DDF1 ID=DDF1; Name=DDF1; organism=Prunus avium; type=genetic_marker; length=101bp
GCGAGCTGGGAGGAGGGTTTTCAAGGAGACCAGGCACCCTGTTTATAGGG
RCGTGAGGAGGAGGAACAATGACAAGTGGGTGTGTGAAATGAGAGAGCCC
A
Alignments
Feature NameTypeLocationAnalysis
Pp05 chromosome Pp05:10052497..10052497. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr5 chromosome PAV_r1.0chr5:7782031..7782031. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)