PavFRI, PavFRI (genetic_marker) Prunus avium

Marker Overview
NameFRI
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:FRI
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTGCATGATCCTGCATGTTGTGACTTTCAGTCGTGAATATGCTTTTCAAAG
3' Flanking SequenceGTTGTCTGGTTCTTTCTTTACAACATTTCAAATTCCAGTTATGTGTCTGT
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [C/C] 'Lapins' [C/T] 'Garnet' [C/C]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G1N/A2.03FRIView
2Sweet Cherry-RL-F1-2015L1N/A0FRIView
3Sweet Cherry-V-F1-6+9K_array1N/A2.56FRIView
4Sweet Cherry-RosBREED-3.8K-20201N/A4.94FRIView
5Sweet Cherry-VxC-F1-6+9K_array1N/A6.74FRIView
Sequence
>FRI ID=FRI; Name=FRI; organism=Prunus avium; type=genetic_marker; length=101bp
TGCATGATCCTGCATGTTGTGACTTTCAGTCGTGAATATGCTTTTCAAAG
YGTTGTCTGGTTCTTTCTTTACAACATTTCAAATTCCAGTTATGTGTCTG
T
Alignments
Feature NameTypeLocationAnalysis
Pp01 chromosome Pp01:1031855..1031855. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:1101102..1101102. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)