PavGH17, PavGH17 (genetic_marker) Prunus avium

Marker Overview
NameGH17
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:GH17
TypeSNP
SNP AllelesT/C
5' Flanking SequenceATTTGTTGAATTGGATGGTTATAGAACAGTGTATATCTATTCTGTGTGAT
3' Flanking SequenceATTTATAGTGGGTAGTTGGTTTCTTGAAGAAATTGGGTTTAGATATTTCA
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [C/T] 'Lapins' [C/C] 'Garnet' [C/C]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
GH17GH17Prunus aviummarker_locus


Sequence
>GH17 ID=GH17|Name=GH17|organism=Prunus avium|type=genetic_marker|length=101bp
ATTTGTTGAATTGGATGGTTATAGAACAGTGTATATCTATTCTGTGTGAT
YATTTATAGTGGGTAGTTGGTTTCTTGAAGAAATTGGGTTTAGATATTTC
A
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R7N/A47.58GH17View
2Sweet Cherry-RL-F1-2015R7N/A61.18GH17View
3Sweet Cherry-RosBREED-3.8K-20207N/A68.41GH17View
Alignments
Feature NameTypeLocationAnalysis
Pp07 chromosome Pp07:20934207..20934207. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr7 chromosome PAV_r1.0chr7:18398610..18398610. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)