PavFAR1, PavFAR1 (genetic_marker) Prunus avium

Marker Overview
NameFAR1
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:FAR1
TypeSNP
SNP AllelesT/C
5' Flanking SequenceAGGTATTCCTAAATATGGGTCCGCTCTGAAAACTGATGATTTTTGAAGAT
3' Flanking SequenceGTGGTCTTTCCAATCAAGAGATTTCACTGTGCCAAAAACAAGATAACATT
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [C/T] 'Lapins' [T/T] 'Garnet' [C/T]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R2N/A72.53FAR1View
2Sweet Cherry-RG-F1-2015G2N/A89.05FAR1View
3Sweet Cherry-RL-F1-2015R2N/A80.81FAR1View
4Sweet Cherry-RosBREED-3.8K-20202N/A71.1FAR1View
Sequence
>FAR1 ID=FAR1; Name=FAR1; organism=Prunus avium; type=genetic_marker; length=101bp
AGGTATTCCTAAATATGGGTCCGCTCTGAAAACTGATGATTTTTGAAGAT
YGTGGTCTTTCCAATCAAGAGATTTCACTGTGCCAAAAACAAGATAACAT
T
Alignments
Feature NameTypeLocationAnalysis
Pp02 chromosome Pp02:30174874..30174874. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr2 chromosome PAV_r1.0chr2:25088783..25088783. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)