PavTUB2, PavTUB2 (genetic_marker) Prunus avium

Marker Overview
NameTUB2
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:TUB2
TypeSNP
SNP AllelesT/C
5' Flanking SequenceGAAAGATGAGTTTTGACAAGCAATGGATGATCTAATCTTTCTTTCTTTGT
3' Flanking SequenceGGAGTTCTGAAAGCATGAATTGTCTGTTGTGTGTGCTTGTGATAGTGAtT
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [C/T] 'Lapins' [T/T] 'Garnet' [C/T]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
TUB2TUB2Prunus aviummarker_locus


Sequence
>TUB2 ID=TUB2|Name=TUB2|organism=Prunus avium|type=genetic_marker|length=101bp
GAAAGATGAGTTTTGACAAGCAATGGATGATCTAATCTTTCTTTCTTTGT
YGGAGTTCTGAAAGCATGAATTGTCTGTTGTGTGTGCTTGTGATAGTGAt
T
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R6N/A10.31TUB2View
2Sweet Cherry-RG-F1-2015G6N/A5.67TUB2View
3Sweet Cherry-RL-F1-2015R6N/A15.1TUB2View
4Sweet Cherry-RosBREED-3.8K-20206N/A14.88TUB2View
Alignments
Feature NameTypeLocationAnalysis
Pp06 chromosome Pp06:4496901..4496901. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr6 chromosome PAV_r1.0chr6:887288..887288. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)