PavGI, PavGI (genetic_marker) Prunus avium

Marker Overview
NameGI
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:GI
TypeSNP
SNP AllelesA/G
5' Flanking SequenceTCTTGCATGTGAGCTTCAGTTGTTCCCTTTGATTTCGAAGGGGATTAATC
3' Flanking SequenceTGCTCACTCTAAAGATGCAAAAAATGTGGCAAAGCCTGCCAAAGAAAATG
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Comment'Regina' [G/G] 'Lapins' [A/G] 'Garnet' [A/G]
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G8N/A16.55GIView
2Sweet Cherry-RL-F1-2015L8N/A20.65GIView
3Sweet Cherry-RosBREED-3.8K-20208N/A17.49GIView
4Sweet Cherry-VxC-F1-6+9K_array8N/A15.32GIView
Sequence
>GI ID=GI; Name=GI; organism=Prunus avium; type=genetic_marker; length=101bp
TCTTGCATGTGAGCTTCAGTTGTTCCCTTTGATTTCGAAGGGGATTAATC
RTGCTCACTCTAAAGATGCAAAAAATGTGGCAAAGCCTGCCAAAGAAAAT
G
Alignments
Feature NameTypeLocationAnalysis
Pp08 chromosome Pp08:4034635..4034635. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr8 chromosome PAV_r1.0chr8:3878052..3878052. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)